RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SLC10A6Q3KNW5 377 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 TRIM61Q5EBN2 209 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 NAIF1Q69YI7 327 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 C19orf48Q6RUI8 117 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 PDZD3Q86UT5 571 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 CPA6Q8N4T0 437 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 USP13Q92995 863 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 ORC3Q9UBD5 711 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 TBX20Q9UMR3 447 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 GPSM3Q9Y4H4 160 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 DTNBO60941 627 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 SEC24BO95487 1268 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 TYMPP19971 482 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 MUTP22033 750 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 DMP1Q13316 513 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-224ENST00000481929 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDAC6-224ENST00000481929 MGAT5BQ3V5L5 792 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 TAS1R3Q7RTX0 852 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 TMEM130Q8N3G9 435 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 CCDC26Q8TAB7 109 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 CD101Q93033 1021 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 TDP1Q9NUW8 608 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 ANKFY1Q9P2R3 1169 aa16.24■□□□□ 0.19
HDAC6-224ENST00000481929 REC8O95072 547 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 ODC1P11926 461 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 ATF6P18850 670 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 MCM7P33993 719 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 SEZ6Q53EL9 994 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 HAUS3Q68CZ6 603 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 ANO7Q6IWH7 933 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 PIP4P1Q86T03 277 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 MAB21L3Q8N8X9 362 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 EZH1Q92800 747 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 CNOT6LQ96LI5 555 aaKnown RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 KMT5AQ9NQR1 393 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 ARHGAP28Q9P2N2 729 aa16.23■□□□□ 0.19
HDAC6-224ENST00000481929 UBQLN1Q9UMX0 589 aaKnown RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 RBM19Q9Y4C8 960 aaKnown RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 HELZ2Q9BYK8 2649 aaKnown RBP16.23■□□□□ 0.19
HDAC6-224ENST00000481929 FREM2Q5SZK8 3169 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 UPK3BL1B0FP48 263 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 UPK3BL2E5RIL1 263 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 CXCL8P10145 99 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 ENGP17813 658 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 CYP3A5P20815 502 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 SPAG1Q07617 926 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 LPCAT2Q7L5N7 544 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 CHCHD4Q8N4Q1 142 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 RIN3Q8TB24 985 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 GIPC2Q8TF65 315 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 PLEKHA5Q9HAU0 1116 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
HDAC6-224ENST00000481929 SMG1Q96Q15 3661 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 EIF4E1BA6NMX2 242 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 XPOTO43592 962 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 TOM1L1O75674 476 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 CAPNS1P04632 268 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 NMT1P30419 496 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 ATXN3P54252 364 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 SEMA3BQ13214 749 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 ZNF423Q2M1K9 1284 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 COL28A1Q2UY09 1125 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 SYT12Q8IV01 421 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 HDDC3Q8N4P3 179 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 OR10T2Q8NGX3 314 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 MRPS31Q92665 395 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
HDAC6-224ENST00000481929 TM6SF1Q9BZW5 370 aa16.21■□□□□ 0.19
HDAC6-224ENST00000481929 GON4LQ3T8J9 2241 aa16.21■□□□□ 0.18
HDAC6-224ENST00000481929 ACACAQ13085 2346 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 ASH1LQ9NR48 2969 aaKnown RBP16.2■□□□□ 0.18
HDAC6-224ENST00000481929 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
HDAC6-224ENST00000481929 KIAA1549LQ6ZVL6 1849 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 TNFRSF10BO14763 440 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 PFKFB2O60825 505 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 HIP1RO75146 1068 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 DPP6P42658 865 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 IFNAR2P48551 515 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 NLRP12P59046 1061 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 PPP2R3AQ06190 1150 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 SCAPQ12770 1279 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 STRN3Q13033 797 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 ZNF268Q14587 947 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-224ENST00000481929 MTF1Q14872 753 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 TXNDC8Q6A555 127 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 ARMCX6Q7L4S7 300 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 TMEM150AQ86TG1 271 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms