RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZNF213O14771 459 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 INSIG1O15503 277 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 DNAJB5O75953 348 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 SNHG28P0DPA3 235 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 SFPQP23246 707 aaKnown RBP eCLIP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 PCSK6P29122 969 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 PLCD1P51178 756 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 TLE1Q04724 770 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 KLF1Q13351 362 aaPredicted RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 IL10RAQ13651 578 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 AARS2Q5JTZ9 985 aaKnown RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 RBM20Q5T481 1227 aaKnown RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 RUSC1-AS1Q66K80 236 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 ANKRD16Q6P6B7 361 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 KRT26Q7Z3Y9 468 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 SPATS2Q86XZ4 545 aaKnown RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 PSD4Q8NDX1 1056 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 FAM136AQ96C01 138 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 ADGRE3Q9BY15 652 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 PRSS22Q9GZN4 317 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 VPS16Q9H269 839 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 SMOC2Q9H3U7 446 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 BRD9Q9H8M2 597 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 TUBA8Q9NY65 449 aaPredicted RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 ETAA1Q9NY74 926 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.33□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 SBNO2Q9Y2G9 1366 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 CYP2D7A0A087X1C5 515 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 SMIM35A0A1B0GVV1 85 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 KCNU1A8MYU2 1149 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 H3BNC9 293 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 QSOX1O00391 747 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 NDUFS2O75306 463 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 ITGALP20701 1170 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CD6P30203 668 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CYP2C19P33261 490 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 SLC16A1P53985 500 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 PSMC1P62191 440 aaKnown RBP3.32□□□□□ -1.88
KDM1A-204ENST00000481879 HABP2Q14520 560 aaPredicted RBP3.32□□□□□ -1.88
KDM1A-204ENST00000481879 RABEP1Q15276 862 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF260Q3ZCT1 412 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CCDC93Q567U6 631 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 TEDDM1Q5T9Z0 273 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 PXDC1Q5TGL8 231 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 RNF219Q5W0B1 726 aaPredicted RBP3.32□□□□□ -1.88
KDM1A-204ENST00000481879 PPP4R3AQ6IN85 833 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 TAF2Q6P1X5 1199 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CATSPERGQ6ZRH7 1159 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF804AQ7Z570 1209 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 KRT73Q86Y46 540 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 KLHDC4Q8TBB5 520 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 DMRTA2Q96SC8 542 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 SPC25Q9HBM1 224 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 MAN1C1Q9NR34 630 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 SIDT1Q9NXL6 827 aaKnown RBP3.32□□□□□ -1.88
KDM1A-204ENST00000481879 TUBD1Q9UJT1 453 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 IPPQ9Y573 584 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CNTNAP2Q9UHC6 1331 aa3.32□□□□□ -1.88
KDM1A-204ENST00000481879 CADPSQ9ULU8 1353 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF785A8K8V0 405 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 H0YIZ8 118 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 ADAMTS3O15072 1205 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 HTRA2O43464 458 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 CHEK2O96017 543 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 RPLP2P05387 115 aaKnown RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 GJB1P08034 283 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 CYP2C18P33260 490 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 CDKN1CP49918 316 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 EEFSECP57772 596 aaKnown RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 RAPGEF1Q13905 1077 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 DAZAP2Q15038 168 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 TRIP6Q15654 476 aaKnown RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 PCID2Q5JVF3 399 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF618Q5T7W0 954 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 RNF187Q5TA31 235 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 PGM2L1Q6PCE3 622 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 WDR53Q7Z5U6 358 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 DTX2Q86UW9 622 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 ZDHHC17Q8IUH5 632 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 SAMD14Q8IZD0 417 aaPredicted RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 GALNT16Q8N428 558 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 FAM109AQ8N4B1 249 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 ATL2Q8NHH9 583 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 JADE3Q92613 823 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 NELL2Q99435 816 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 CNPPD1Q9BV87 410 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 GNL3LQ9NVN8 582 aaKnown RBP3.31□□□□□ -1.88
KDM1A-204ENST00000481879 RLIMQ9NVW2 624 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 DLL3Q9NYJ7 618 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 CFAP97Q9P2B7 532 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 LIMCH1Q9UPQ0 1083 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 RAD54BQ9Y620 910 aa3.31□□□□□ -1.88
KDM1A-204ENST00000481879 LOC105371045A0A1W2PR82 267 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 MYMKA6NI61 221 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 F2RL2O00254 374 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 PPM1DO15297 605 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 VPS4BO75351 444 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 PDHA1P08559 390 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 GNAI3P08754 354 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms