RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 TMEM161BQ8NDZ6 487 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 ZNF461Q8TAF7 563 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 TMX3Q96JJ7 454 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 GRIP2Q9C0E4 1043 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 CNTN3Q9P232 1028 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 ITPR1Q14643 2758 aa9.81□□□□□ -0.84
HLA-B-253ENST00000481849 H7C4K7 107 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SEC24AO95486 1093 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 CXCL8P10145 99 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 MAPTP10636 758 aaKnown RBP9.8□□□□□ -0.84
HLA-B-253ENST00000481849 GLULP15104 373 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 CD72P21854 359 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 GUCY2FP51841 1108 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SMTNP53814 917 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SLC12A3P55017 1021 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 DMWDQ09019 674 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SLC44A4Q53GD3 710 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SLC8B1Q6J4K2 584 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 PHLDB3Q6NSJ2 640 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SYT2Q8N9I0 419 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-253ENST00000481849 RASSF8Q8NHQ8 419 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 TCEAL4Q96EI5 215 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SHDQ96IW2 340 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 TBC1D32Q96NH3 1257 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 TIPINQ9BVW5 301 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 PLA2G2FQ9BZM2 168 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 HAPLN2Q9GZV7 340 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 ZHX3Q9H4I2 956 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 TIMMDC1Q9NPL8 285 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 KCNH3Q9ULD8 1083 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 MTF2Q9Y483 593 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-253ENST00000481849 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-253ENST00000481849 INSL5Q9Y5Q6 135 aa9.8□□□□□ -0.84
HLA-B-253ENST00000481849 IGSF10Q6WRI0 2623 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 SYN3O14994 580 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 CLDN3O15551 220 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ABLIM3O94929 683 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 KRT18P05783 430 aaKnown RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ADRB1P08588 477 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 POU2F2P09086 479 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 OR4Q2P0C623 313 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 MYL4P12829 197 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 CPB1P15086 417 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ATF2P15336 505 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 GJA1P17302 382 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 PTPN2P17706 415 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 RPL9P32969 192 aaKnown RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 TNFSF9P41273 254 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 LIG4P49917 911 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 CDR1P51861 262 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 STARD6P59095 220 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ADCY1Q08828 1119 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 GRM2Q14416 872 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 MLF2Q15773 248 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 TMEM119Q4V9L6 283 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ZBTB41Q5SVQ8 909 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 HYIQ5T013 277 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 TANGO2Q6ICL3 276 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 ZNF280DQ6N043 979 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 PDZD4Q76G19 769 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 GPBP1Q86WP2 473 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 C1orf210Q8IVY1 113 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 MYCT1Q8N699 235 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 PJA1Q8NG27 643 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 SUSD3Q96L08 255 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 PGLYRP2Q96PD5 576 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 REEP2Q9BRK0 252 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 NTPCRQ9BSD7 190 aaKnown RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 C17orf75Q9HAS0 396 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 SPATA6Q9NWH7 488 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-253ENST00000481849 DLGAP2Q9P1A6 1054 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 C2orf16Q68DN1 1984 aa9.79□□□□□ -0.84
HLA-B-253ENST00000481849 TDRD15B5MCY1 1934 aaKnown RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 KANSL1LA0AUZ9 987 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 ARHGEF37A1IGU5 675 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 FAM170BA6NMN3 283 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 LACTBL1A8MY62 500 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 K7ENM7 598 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 HNRNPDLO14979 420 aaKnown RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 TBC1D4O60343 1298 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 ECI2O75521 394 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 CENPBP07199 599 aaPredicted RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 CLTAP09496 248 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 SP9P0CG40 484 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 UBA7P41226 1012 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 CCR2P41597 374 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 PFKPQ01813 784 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 GRIN1Q05586 938 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 PPP2R3AQ06190 1150 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 MCL1Q07820 350 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 TWF1Q12792 350 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 MRPL58Q14197 206 aaKnown RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 MCM6Q14566 821 aa9.78□□□□□ -0.84
HLA-B-253ENST00000481849 KARSQ15046 597 aaKnown RBP9.78□□□□□ -0.84
HLA-B-253ENST00000481849 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms