RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 PKMYT1Q99640 499 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 FAM83CQ9BQN1 747 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 TASP1Q9H6P5 420 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 DERAQ9Y315 318 aa14.37□□□□□ -0.11
PTPN7-212ENST00000480836 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
PTPN7-212ENST00000480836 GOLGA8IPA6NC78 632 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 GOLGA8JA6NMD2 632 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 XPOTO43592 962 aaKnown RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 EXTL3O43909 919 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 TAF6P49848 677 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 KPNA1P52294 538 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 CEBPZQ03701 1054 aaKnown RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 RESTQ13127 1097 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 TXNDC8Q6A555 127 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 HEATR6Q6AI08 1181 aaKnown RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 SPEM1Q8N4L4 309 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 CSGALNACT1Q8TDX6 532 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 SLC22A12Q96S37 553 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 ABI2Q9NYB9 513 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-212ENST00000480836 HSFX1Q9UBD0 423 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
PTPN7-212ENST00000480836 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 VPS37CA5D8V6 355 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 GDF9O60383 454 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 TADA3O75528 432 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 WEE1P30291 646 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 HOXD13P35453 343 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 PXNP49023 591 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 NLRP12P59046 1061 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 FSTL4Q6MZW2 842 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 YAF2Q8IY57 180 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 C1orf127Q8N9H9 656 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 FAM200AQ8TCP9 573 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 BPIFB1Q8TDL5 484 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 POMGNT1Q8WZA1 660 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 E2F7Q96AV8 911 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 CYP2S1Q96SQ9 504 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 CBWD1Q9BRT8 395 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 AGAP1Q9UPQ3 857 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 NME7Q9Y5B8 376 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
PTPN7-212ENST00000480836 PTPRJQ12913 1337 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 DENND4CQ5VZ89 1909 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 NCOR2Q9Y618 2525 aa14.35□□□□□ -0.11
PTPN7-212ENST00000480836 ATG2BQ96BY7 2078 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 ATP2C2O75185 946 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 PRPF6O94906 941 aaKnown RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 ITGB3P05106 788 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 ARSAP15289 507 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 CYP2F1P24903 491 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 TUFMP49411 452 aaKnown RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 CCR3P51677 355 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 DDR2Q16832 855 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 ARHGAP29Q52LW3 1261 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 LMBRD2Q68DH5 695 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 SLFN12LQ6IEE8 588 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 PRR23BQ6ZRT6 265 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 RALGPS2Q86X27 583 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 CMTM8Q8IZV2 173 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 KRI1Q8N9T8 703 aaKnown RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 USP28Q96RU2 1077 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 C8orf33Q9H7E9 229 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 MRPL44Q9H9J2 332 aaKnown RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 OBP2AQ9NY56 170 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
PTPN7-212ENST00000480836 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-212ENST00000480836 OBSL1O75147 1896 aa14.33□□□□□ -0.11
PTPN7-212ENST00000480836 TCHHQ07283 1943 aa14.33□□□□□ -0.11
PTPN7-212ENST00000480836 FRMD3A2A2Y4 597 aa14.33□□□□□ -0.12
PTPN7-212ENST00000480836 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-212ENST00000480836 SYT1P21579 422 aa14.33□□□□□ -0.12
PTPN7-212ENST00000480836 SCP2P22307 547 aa14.33□□□□□ -0.12
PTPN7-212ENST00000480836 LMO2P25791 158 aa14.33□□□□□ -0.12
PTPN7-212ENST00000480836 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
PTPN7-212ENST00000480836 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-212ENST00000480836 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
PTPN7-212ENST00000480836 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms