RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 IQCB1Q15051 598 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 INTS6LQ5JSJ4 861 aaKnown RBP21.1■□□□□ 0.97
LIME1-205ENST00000480139 SCARA5Q6ZMJ2 495 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 TCEAL8Q8IYN2 117 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 TTC39CQ8N584 583 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 EHBP1Q8NDI1 1231 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 ANKRD20A12PQ8NF67 263 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 CMASQ8NFW8 434 aaPredicted RBP21.1■□□□□ 0.97
LIME1-205ENST00000480139 ELMO3Q96BJ8 720 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 TMEM209Q96SK2 561 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 PKMYT1Q99640 499 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 RHOBTB2Q9BYZ6 727 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 SDCBP2Q9H190 292 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 ZDHHC7Q9NXF8 308 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 THEGQ9P2T0 379 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 OR4Q2P0C623 313 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 KCNA5P22460 613 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 HOXA9P31269 272 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 RAP1GAPP47736 663 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 KRT31Q15323 416 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 NFE2Q16621 373 aaPredicted RBP21.09■□□□□ 0.97
LIME1-205ENST00000480139 LEXMQ3ZCV2 418 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 LIN9Q5TKA1 542 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 SYCE2Q6PIF2 218 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 RNF19BQ6ZMZ0 732 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 EP400NLQ6ZTU2 488 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 CCDC149Q6ZUS6 474 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 UNC93AQ86WB7 457 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 SMRP1Q8NCR6 262 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 OR6B3Q8NGW1 331 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 NT5C1BQ96P26 610 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 GCNT4Q9P109 453 aa21.09■□□□□ 0.97
LIME1-205ENST00000480139 LIMA1Q9UHB6 759 aaKnown RBP21.09■□□□□ 0.97
LIME1-205ENST00000480139 MTMR11A4FU01 709 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 LRRC10BA6NIK2 292 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 BECN2A8MW95 431 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 ZMYND10O75800 440 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 TPM2P07951 284 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 POU2F2P09086 479 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 HNRNPA1P09651 372 aaKnown RBP eCLIP21.08■□□□□ 0.97
LIME1-205ENST00000480139 SPATA31D3P0C874 917 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 TBXAS1P24557 533 aaPredicted RBP21.08■□□□□ 0.97
LIME1-205ENST00000480139 LMO2P25791 158 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 CDH8P55286 799 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 ITIH3Q06033 890 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 ADCY1Q08828 1119 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 CUL2Q13617 745 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 MAPRE1Q15691 268 aaKnown RBP21.08■□□□□ 0.97
LIME1-205ENST00000480139 SLC39A12Q504Y0 691 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 FAM171BQ6P995 826 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 LRSAM1Q6UWE0 723 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 CYP26C1Q6V0L0 522 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 GBP6Q6ZN66 633 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 SPATA31D4Q6ZUB0 917 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 LRRTM3Q86VH5 581 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 TATDN2Q93075 761 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 SYT15Q9BQS2 421 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 INTS2Q9H0H0 1204 aaKnown RBP21.08■□□□□ 0.97
LIME1-205ENST00000480139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.08■□□□□ 0.977e-7■■■■■ 94.2
LIME1-205ENST00000480139 CD207Q9UJ71 328 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 NME7Q9Y5B8 376 aa21.08■□□□□ 0.97
LIME1-205ENST00000480139 A8MXQ7 604 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 VNN2O95498 520 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 C8AP07357 584 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 WEE2P0C1S8 567 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 ACAT1P24752 427 aaKnown RBP21.07■□□□□ 0.96
LIME1-205ENST00000480139 ELF1P32519 619 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 GCNT1Q02742 428 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 EXOC3L4Q17RC7 722 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 AAK1Q2M2I8 961 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 PUS10Q3MIT2 529 aaKnown RBP21.07■□□□□ 0.96
LIME1-205ENST00000480139 FAM200AQ8TCP9 573 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 SPPL2BQ8TCT7 592 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 TNIP3Q96KP6 325 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 S1PR5Q9H228 398 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 CBX8Q9HC52 389 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 ABCB6Q9NP58 842 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 PRDM6Q9NQX0 595 aa21.07■□□□□ 0.96
LIME1-205ENST00000480139 H3BQ06 376 aaPredicted RBP21.06■□□□□ 0.96
LIME1-205ENST00000480139 HCRTO43612 131 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 CILPO75339 1184 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 SEC24AO95486 1093 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
LIME1-205ENST00000480139 ZNF445P59923 1031 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 YWHAEP62258 255 aaKnown RBP21.06■□□□□ 0.96
LIME1-205ENST00000480139 SMYD5Q6GMV2 418 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 TRIM65Q6PJ69 517 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 SLC7A14Q8TBB6 771 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 MYCBPAPQ8TBZ2 947 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 ATXN2LQ8WWM7 1075 aaKnown RBP21.06■□□□□ 0.96
LIME1-205ENST00000480139 FUBP3Q96I24 572 aaKnown RBP eCLIP21.06■□□□□ 0.96
LIME1-205ENST00000480139 DNAI2Q9GZS0 605 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 ADAM7Q9H2U9 754 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 CYP4F11Q9HBI6 524 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 TAB2Q9NYJ8 693 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 PTPRDP23468 1912 aa21.06■□□□□ 0.96
LIME1-205ENST00000480139 SPDYE4A6NLX3 237 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PRRG1O14668 218 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 SLC34A2O95436 690 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PDGFRBP09619 1106 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms