RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 EML4Q9HC35 981 aaKnown RBP9.34□□□□□ -0.91
TTC3-216ENST00000479930 MRM3Q9HC36 420 aaKnown RBP9.34□□□□□ -0.91
TTC3-216ENST00000479930 GSAPA4D1B5 854 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 KPNA7A9QM74 516 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PDGFRBP09619 1106 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 NUP107P57740 925 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PLD3Q8IV08 490 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 DDHD1Q8NEL9 900 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 E2F7Q96AV8 911 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 KLRF2D3W0D1 207 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 USP17L21D6R901 530 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 FAM227AF5H4B4 570 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 DDX3XO00571 662 aaKnown RBP eCLIP9.33□□□□□ -0.929e-11■■□□□ 12.8
TTC3-216ENST00000479930 AVILO75366 819 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 APOA1P02647 267 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PTPN3P26045 913 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ITIH5Q86UX2 942 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PROSER1Q86XN7 944 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 DNAJC10Q8IXB1 793 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 SLC39A2Q9NP94 309 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 TMEM120BA0PK00 339 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 C17orf102A2RUQ5 167 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 STX11O75558 287 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 HSD17B2P37059 387 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 SPP2Q13103 211 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 HPS6Q86YV9 775 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ZNF579Q8NAF0 562 aaKnown RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 UBXN10Q96LJ8 280 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.33□□□□□ -0.924e-11■□□□□ 9
TTC3-216ENST00000479930 AVENQ9NQS1 362 aaPredicted RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 WWOXQ9NZC7 414 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 SESN1Q9Y6P5 492 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 MROH5Q6ZUA9 1318 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 NR2F1P10589 423 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 SLC11A2P49281 568 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 NUDT2P50583 147 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 GRAMD1BQ3KR37 738 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PDCD4Q53EL6 469 aaKnown RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 TAF8Q7Z7C8 310 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 RDM1Q8NG50 284 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 TMEM87BQ96K49 555 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 NRBP1Q9UHY1 535 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 A0A0G2JLW4 131 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 EIF4A3P38919 411 aaKnown RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 IL9RQ01113 521 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 TRIM58Q8NG06 486 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 AURKCQ9UQB9 309 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 STAU1O95793 577 aaKnown RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 GTF2IRD2BQ6EKJ0 949 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 GTF2IRD2Q86UP8 949 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 KCNB2Q92953 911 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 COL26A1Q96A83 441 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 C19orf60Q96EN9 201 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ADPRHL2Q9NX46 363 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 C15orf38-AP3S2A0A0A6YYH1 394 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 RTN3O95197 1032 aaPredicted RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 PIK3R1P27986 724 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 RANBP1P43487 201 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 ATXN1P54253 815 aaKnown RBP9.33□□□□□ -0.92
TTC3-216ENST00000479930 PPARAQ07869 468 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 CHPFQ8IZ52 775 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 SDR42E1Q8WUS8 393 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 WNK4Q96J92 1243 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 NAGPAQ9UK23 515 aa9.33□□□□□ -0.92
TTC3-216ENST00000479930 RIDAP52758 137 aaKnown RBP9.32□□□□□ -0.92
TTC3-216ENST00000479930 EIF2S3LQ2VIR3 472 aaKnown RBP9.32□□□□□ -0.92
TTC3-216ENST00000479930 EPHX4Q8IUS5 362 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 RELTQ969Z4 430 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
TTC3-216ENST00000479930 PLD1Q13393 1074 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 FAM83BQ5T0W9 1011 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 ATPAF2Q8N5M1 289 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 TRIM4Q9C037 500 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 PKD2L2Q9NZM6 624 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 L1RE1Q9UN81 338 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 MAGED1Q9Y5V3 778 aaPredicted RBP9.32□□□□□ -0.92
TTC3-216ENST00000479930 COX10Q12887 443 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 CBX3Q13185 183 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 GRIK4Q16099 956 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 C16orf46Q6P387 395 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 HERC6Q8IVU3 1022 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 CXorf40AQ8TE69 158 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 KAT6AQ92794 2004 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 C2orf40Q9H1Z8 148 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 SPG21Q9NZD8 308 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 OR10H1Q9Y4A9 318 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 SCO1O75880 301 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 TTLL1O95922 423 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 SQLEQ14534 574 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 SWSAP1Q6NVH7 229 aa9.32□□□□□ -0.92
TTC3-216ENST00000479930 ALKBH5Q6P6C2 394 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms