RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FAM213AQ9BRX8 229 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 APOL6Q9BWW8 343 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 TMEM8AQ9HCN3 771 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 AVENQ9NQS1 362 aaPredicted RBP9.59□□□□□ -0.87
DDX56-211ENST00000479602 GDAP2Q9NXN4 497 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 PARP2Q9UGN5 583 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 CTNND2Q9UQB3 1225 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 BACE2Q9Y5Z0 518 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 TSC2P49815 1807 aa9.59□□□□□ -0.88
DDX56-211ENST00000479602 SF3B1O75533 1304 aaKnown RBP eCLIP9.58□□□□□ -0.88
DDX56-211ENST00000479602 NOTCH4Q99466 2003 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 TRIM49BA6NDI0 452 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 SYN3O14994 580 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 CLIC2O15247 247 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 ABLIM3O94929 683 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 C4BPAP04003 597 aaKnown RBP9.58□□□□□ -0.88
DDX56-211ENST00000479602 CYP11A1P05108 521 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 KRT13P13646 458 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 CASP4P49662 377 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 CYP2J2P51589 502 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 VAMP7P51809 220 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FOXK2Q01167 660 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FZD5Q13467 585 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 IQCB1Q15051 598 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FAM171A1Q5VUB5 890 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 PARM1Q6UWI2 310 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 TTC39CQ8N584 583 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FLCNQ8NFG4 579 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 NELL1Q92832 810 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 NKD2Q969F2 451 aaPredicted RBP9.58□□□□□ -0.88
DDX56-211ENST00000479602 JAKMIP2Q96AA8 810 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 SAAL1Q96ER3 474 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FAM81BQ96LP2 452 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 FNBP1Q96RU3 617 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 HSD3B7Q9H2F3 369 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 IKZF4Q9H2S9 585 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 SEMA4AQ9H3S1 761 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 MTRRQ9UBK8 725 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 MAPK8IP1Q9UQF2 711 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 NUMBLQ9Y6R0 609 aa9.58□□□□□ -0.88
DDX56-211ENST00000479602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 SYCE3A1L190 88 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 CASTOR2A6NHX0 329 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 LRRIQ3A6PVS8 624 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 SMTNL1A8MU46 457 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 TRAPPC3O43617 180 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 CFHP08603 1231 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 NFICP08651 508 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 TYMPP19971 482 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 RFX1P22670 979 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 MATR3P43243 847 aaKnown RBP eCLIP9.57□□□□□ -0.88
DDX56-211ENST00000479602 ZNF165P49910 485 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 GPC5P78333 572 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 NTHL1P78549 312 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 SOX4Q06945 474 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 KRT39Q6A163 491 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 JADE1Q6IE81 842 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 SLC8B1Q6J4K2 584 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 C11orf57Q6ZUT1 292 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 APTXQ7Z2E3 356 aaKnown RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 GRASPQ7Z6J2 395 aaPredicted RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 C3orf58Q8NDZ4 430 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 ZSWIM2Q8NEG5 633 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 PLEKHO2Q8TD55 490 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 FGF13Q92913 245 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 OSBPL6Q9BZF3 934 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 XYLT2Q9H1B5 865 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 TBC1D17Q9HA65 648 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 PDE11AQ9HCR9 933 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 DNMT3BQ9UBC3 853 aaKnown RBP9.57□□□□□ -0.88
DDX56-211ENST00000479602 SIX4Q9UIU6 781 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 FBXL5Q9UKA1 691 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 DSEQ9UL01 958 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 MAFFQ9ULX9 164 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 NFE2L3Q9Y4A8 694 aa9.57□□□□□ -0.88
DDX56-211ENST00000479602 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 SCN1AP35498 2009 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 ACACBO00763 2458 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 TACC1O75410 805 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 MICAL2O94851 1124 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 ASS1P00966 412 aaKnown RBP9.56□□□□□ -0.88
DDX56-211ENST00000479602 TNNC2P02585 160 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 C8AP07357 584 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 FSHRP23945 695 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 OR1D2P34982 312 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 MXI1P50539 228 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 CLCNKBP51801 687 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 WNT7BP56706 349 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 RBP5P82980 135 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms