RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 HEATR6Q6AI08 1181 aaKnown RBP14.3□□□□□ -0.12
VCL-205ENST00000478896 TXNDC11Q6PKC3 985 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 DCP1BQ8IZD4 617 aaKnown RBP14.3□□□□□ -0.12
VCL-205ENST00000478896 CCSER1Q9C0I3 900 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 SMG9Q9H0W8 520 aaKnown RBP14.3□□□□□ -0.12
VCL-205ENST00000478896 MRPL44Q9H9J2 332 aaKnown RBP14.3□□□□□ -0.12
VCL-205ENST00000478896 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 CCDC39Q9UFE4 941 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 OBSL1O75147 1896 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 RALGAPA1Q6GYQ0 2036 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 DNAH14Q0VDD8 3507 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 KPNA7A9QM74 516 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 IL18RAPO95256 599 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 AVPR1AP37288 418 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 TXLNAP40222 546 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 TSPY1Q01534 308 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 TNK2Q07912 1038 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 DMWDQ09019 674 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 BFSP1Q12934 665 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 PTPAQ15257 358 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 CEP68Q76N32 757 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 RTKNQ9BST9 563 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 ST6GALNAC4Q9H4F1 302 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 ZMYM5Q9UJ78 669 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
VCL-205ENST00000478896 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.29□□□□□ -0.12
VCL-205ENST00000478896 STYXL1Q9Y6J8 313 aa14.29□□□□□ -0.12
VCL-205ENST00000478896 GCNT3O95395 438 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 RETP07949 1114 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 HAPLN1P10915 354 aaPredicted RBP14.28□□□□□ -0.12
VCL-205ENST00000478896 CNR2P34972 360 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 PNPLA4P41247 253 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 TFAMQ00059 246 aaKnown RBP14.28□□□□□ -0.12
VCL-205ENST00000478896 POU5F1Q01860 360 aaKnown RBP14.28□□□□□ -0.12
VCL-205ENST00000478896 SRSF5Q13243 272 aaKnown RBP14.28□□□□□ -0.12
VCL-205ENST00000478896 ITPRIPL2Q3MIP1 535 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 LRRTM3Q86VH5 581 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 CMTM8Q8IZV2 173 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 MAB21L3Q8N8X9 362 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
VCL-205ENST00000478896 EPSTI1Q96J88 318 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 FAM213AQ9BRX8 229 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 IL21Q9HBE4 155 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 TBC1D7Q9P0N9 293 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 PCDHB5Q9Y5E4 795 aa14.28□□□□□ -0.12
VCL-205ENST00000478896 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.12
VCL-205ENST00000478896 DCDC2BA2VCK2 349 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 K7ESF4 209 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 PRPF40AO75400 957 aaKnown RBP14.27□□□□□ -0.13
VCL-205ENST00000478896 PAPSS2O95340 614 aaPredicted RBP14.27□□□□□ -0.13
VCL-205ENST00000478896 ITGB3P05106 788 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 TGM1P22735 817 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 DDX6P26196 483 aaKnown RBP eCLIP14.27□□□□□ -0.13
VCL-205ENST00000478896 WEE1P30291 646 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 POLR2BP30876 1174 aaKnown RBP14.27□□□□□ -0.13
VCL-205ENST00000478896 CCINQ13939 588 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 CRELD2Q6UXH1 353 aaPredicted RBP14.27□□□□□ -0.13
VCL-205ENST00000478896 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 SYNPOQ8N3V7 929 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 NETO1Q8TDF5 533 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 MRPS31Q92665 395 aaKnown RBP14.27□□□□□ -0.13
VCL-205ENST00000478896 SAAL1Q96ER3 474 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 ACCSQ96QU6 501 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 PI4K2AQ9BTU6 479 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 SLC46A2Q9BY10 475 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 SEMA4GQ9NTN9 838 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 CLIC4Q9Y696 253 aa14.27□□□□□ -0.13
VCL-205ENST00000478896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 HRO43593 1189 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 HUS1O60921 280 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 LRP3O75074 770 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 KRT19P08727 400 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 CSH1P0DML2 217 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 CSH2P0DML3 217 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 IDEP14735 1019 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 GAP43P17677 238 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 ADSSP30520 456 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 GPR15P49685 360 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 NLRP12P59046 1061 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 MYL7Q01449 175 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
VCL-205ENST00000478896 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 CC2D1AQ6P1N0 951 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms