RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CAMK4Q16566 473 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 CCDC142Q17RM4 750 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SLC5A9Q2M3M2 681 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ZACNQ401N2 412 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 IQCEQ6IPM2 695 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 CLEC17AQ6ZS10 378 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SV2AQ7L0J3 742 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 HS6ST3Q8IZP7 471 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ELMOD1Q8N336 334 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ST13P5Q8NFI4 369 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ING5Q8WYH8 240 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 FGF13Q92913 245 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ZNF512Q96ME7 567 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SEPT5Q99719 369 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 TSG101Q99816 390 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 DNAJC25Q9H1X3 360 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 ABI2Q9NYB9 513 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 CDH7Q9ULB5 785 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 SORCS3Q9UPU3 1222 aa16.71■□□□□ 0.27
HMGA1-206ENST00000478214 MRPS23Q9Y3D9 190 aaKnown RBP16.71■□□□□ 0.27
HMGA1-206ENST00000478214 NRG2O14511 850 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 WARSP23381 471 aaKnown RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 PCSK1P29120 753 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 CCR2P41597 374 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 GCLMP48507 274 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 EPHB3P54753 998 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 TNNC1P63316 161 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 PLD1Q13393 1074 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 STIM1Q13586 685 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 MGAT5BQ3V5L5 792 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 INTS6LQ5JSJ4 861 aaKnown RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 NPAS3Q8IXF0 933 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 ZC3H3Q8IXZ2 948 aaKnown RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 RSAD2Q8WXG1 361 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 PKMYT1Q99640 499 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 MRPL45Q9BRJ2 306 aaKnown RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 KCNK12Q9HB15 430 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 AVENQ9NQS1 362 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-206ENST00000478214 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 GTF3C4Q9UKN8 822 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 PCDHB5Q9Y5E4 795 aa16.7■□□□□ 0.26
HMGA1-206ENST00000478214 MYBPHLA2RUH7 354 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 PPP1R3GB7ZBB8 358 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 PSMA7O14818 248 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 GPR37L1O60883 481 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 ATP2C2O75185 946 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 TACC1O75410 805 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 CLSTN1O94985 981 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 PDGFRBP09619 1106 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 EPB41P11171 864 aaKnown RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 CEBPBP17676 345 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 CCNE1P24864 410 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 TUFMP49411 452 aaKnown RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 FKBP3Q00688 224 aaKnown RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 LRRC63Q05C16 580 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 NFE2Q16621 373 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 TMEM31Q5JXX7 168 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 CYP4A22Q5TCH4 519 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 POTEHQ6S545 545 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 PDZD4Q76G19 769 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 DHTKD1Q96HY7 919 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-206ENST00000478214 SYT15Q9BQS2 421 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 SNX25Q9H3E2 840 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 MMRN2Q9H8L6 949 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 NME7Q9Y5B8 376 aa16.69■□□□□ 0.26
HMGA1-206ENST00000478214 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 MYL4P12829 197 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 ATF6P18850 670 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 EPHA5P54756 1037 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 CDH8P55286 799 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 ENPEPQ07075 957 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 HTR4Q13639 388 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 ZNF667Q5HYK9 610 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 TRIM67Q6ZTA4 783 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 DNAJB7Q7Z6W7 309 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 TMC8Q8IU68 726 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 TAS1R2Q8TE23 839 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 LPIN3Q9BQK8 851 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 LRFN3Q9BTN0 628 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
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