RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 TSPY1Q01534 308 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 NCOA4Q13772 614 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 GRASPQ7Z6J2 395 aaPredicted RBP12.36□□□□□ -0.43
RPSA-207ENST00000478027 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 DCP1BQ8IZD4 617 aaKnown RBP12.36□□□□□ -0.43
RPSA-207ENST00000478027 ZDHHC14Q8IZN3 488 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 KBTBD7Q8WVZ9 684 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 ACSF2Q96CM8 615 aaPredicted RBP12.36□□□□□ -0.43
RPSA-207ENST00000478027 PGLYRP2Q96PD5 576 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 C1QTNF1Q9BXJ1 281 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 DDX43Q9NXZ2 648 aaKnown RBP12.36□□□□□ -0.43
RPSA-207ENST00000478027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPSA-207ENST00000478027 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 OBSL1O75147 1896 aa12.36□□□□□ -0.43
RPSA-207ENST00000478027 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 GOLGA6L22H0YM25 854 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 TACC1O75410 805 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 TRIM49P0CI25 452 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 TRIM49CP0CI26 452 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 COL9A1P20849 921 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 TNNC1P63316 161 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 PPP3CAQ08209 521 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 DUSP4Q13115 394 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 PLD1Q13393 1074 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 INTS6LQ5JSJ4 861 aaKnown RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 TTI2Q6NXR4 508 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 OSTM1Q86WC4 334 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 ATAD1Q8NBU5 361 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 TAF4BQ92750 862 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43not detected■■■■□ 21.5
RPSA-207ENST00000478027 EEF2KMTQ96G04 330 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 PKMYT1Q99640 499 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 CRISPLD1Q9H336 500 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 DNMT3BQ9UBC3 853 aaKnown RBP12.35□□□□□ -0.43
RPSA-207ENST00000478027 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
RPSA-207ENST00000478027 MYH10P35580 1976 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 STX10O60499 249 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
RPSA-207ENST00000478027 RHOP08100 348 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ALADP13716 330 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 PTPN2P17706 415 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 FSHRP23945 695 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ALDH1A3P47895 512 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 GCLMP48507 274 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 TWF1Q12792 350 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 PAK1Q13153 545 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
RPSA-207ENST00000478027 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ZNF667Q5HYK9 610 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 DUSP9Q99956 384 aaKnown RBP12.34□□□□□ -0.43
RPSA-207ENST00000478027 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 HCFC1R1Q9NWW0 138 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 CEP72Q9P209 647 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
RPSA-207ENST00000478027 ZFP37Q9Y6Q3 630 aaPredicted RBP12.34□□□□□ -0.43
RPSA-207ENST00000478027 ZNF638Q14966 1978 aaKnown RBP12.34□□□□□ -0.43
RPSA-207ENST00000478027 DCXO43602 365 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 MICAL2O94851 1124 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 HAPLN1P10915 354 aaPredicted RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 P4HA1P13674 534 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 LMO2P25791 158 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 EPHB3P54753 998 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 EPHA5P54756 1037 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 NTHL1P78549 312 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 KRT39Q6A163 491 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
RPSA-207ENST00000478027 FRMD5Q7Z6J6 570 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
RPSA-207ENST00000478027 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms