RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ZNF473Q8WTR7 871 aaKnown RBP12.93□□□□□ -0.34
PTPRF-212ENST00000477970 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
PTPRF-212ENST00000477970 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 GH1P01241 217 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 WEE2P0C1S8 567 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 ATF2P15336 505 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 POLR2BP30876 1174 aaKnown RBP12.92□□□□□ -0.34
PTPRF-212ENST00000477970 CCNA1P78396 465 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 NFX1Q12986 1120 aaKnown RBP12.92□□□□□ -0.34
PTPRF-212ENST00000477970 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 ARMCX2Q7L311 632 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 TTC39CQ8N584 583 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 RNF186Q9NXI6 227 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
PTPRF-212ENST00000477970 HOMEZQ8IX15 550 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 CCT8L2Q96SF2 557 aa12.92□□□□□ -0.34
PTPRF-212ENST00000477970 TJP3O95049 919 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 LGALS2P05162 132 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 BRD2P25440 801 aaKnown RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 GABRB2P47870 512 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ACAP1Q15027 740 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 TAZQ16635 292 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 KATNBL1Q9H079 304 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 CDC42EP4Q9H3Q1 356 aaKnown RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ASIC3Q9UHC3 531 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 SIX4Q9UIU6 781 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 R3HDM2Q9Y2K5 976 aaKnown RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 SIGLEC16A6NMB1 481 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 LIASO43766 372 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 MAGEA9P43362 315 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ERMARDQ5T6L9 678 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 EEF1DP3Q658K8 133 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 TTC19Q6DKK2 380 aaPredicted RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ERICH1Q86X53 443 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 CCDC50Q8IVM0 306 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 TFAP2BQ92481 460 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 CENPHQ9H3R5 247 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 INO80B-WBP1J3KQ70 363 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 RGS16O15492 202 aaPredicted RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 STRNO43815 780 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 CPP00450 1065 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ABHD2P08910 425 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 HIBCHQ6NVY1 386 aaPredicted RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 GPRC5AQ8NFJ5 357 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 COPS5Q92905 334 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 NLRP4Q96MN2 994 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 SCLT1Q96NL6 688 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 INO80BQ9C086 356 aaPredicted RBP12.91□□□□□ -0.34
PTPRF-212ENST00000477970 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
PTPRF-212ENST00000477970 B4GALT5O43286 388 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 TTC4O95801 387 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 CETPP11597 493 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ATP5DP30049 168 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ITGA8P53708 1063 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 C2CD6Q53TS8 623 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 NKD2Q969F2 451 aaPredicted RBP12.9□□□□□ -0.34
PTPRF-212ENST00000477970 RNPEPQ9H4A4 650 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 MINDY3Q9H8M7 445 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTPRF-212ENST00000477970 C2CD2Q9Y426 696 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 DCDC2CA8MYV0 355 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 GPR25O00155 361 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 O00370 1275 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 RASGRF2O14827 1237 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 CLCN3P51790 818 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 RAD23BP54727 409 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 IRF5Q13568 498 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ZNF268Q14587 947 aaPredicted RBP12.9□□□□□ -0.34
PTPRF-212ENST00000477970 CCDC142Q17RM4 750 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 TAOK1Q7L7X3 1001 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 C1orf127Q8N9H9 656 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ADAM7Q9H2U9 754 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 ANAPC5Q9UJX4 755 aa12.9□□□□□ -0.34
PTPRF-212ENST00000477970 hCG_1818297A0A087WSY0 165 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 A0A087WUV0 522 aaPredicted RBP12.9□□□□□ -0.35
PTPRF-212ENST00000477970 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.35
PTPRF-212ENST00000477970 IQCF3P0C7M6 154 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 P4HA1P13674 534 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 INSRRP14616 1297 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 FGFR4P22455 802 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 OGDHQ02218 1023 aa12.9□□□□□ -0.35
PTPRF-212ENST00000477970 INCA1Q0VD86 236 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms