RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 HRO43593 1189 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 RETP07949 1114 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 WEE1P30291 646 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 DDIT3P35638 169 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 TNK2Q07912 1038 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 SRSF5Q13243 272 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 WSCD1Q658N2 575 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 DYMQ7RTS9 669 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 BRAPQ7Z569 592 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 LRRTM3Q86VH5 581 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 SFR1Q86XK3 245 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 SPPL2BQ8TCT7 592 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 C2orf15Q8WU43 125 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 POMGNT1Q8WZA1 660 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 RTKNQ9BST9 563 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 ST6GALNAC4Q9H4F1 302 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 THG1LQ9NWX6 298 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
CPSF7-211ENST00000477890 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
CPSF7-211ENST00000477890 SPTBN2O15020 2390 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 KPNA7A9QM74 516 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 PAPSS2O95340 614 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-211ENST00000477890 HAPLN1P10915 354 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-211ENST00000477890 CNR2P34972 360 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 MCM2P49736 904 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 SMARCB1Q12824 385 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 CCINQ13939 588 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 ITPRIPL2Q3MIP1 535 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 SV2CQ496J9 727 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-211ENST00000477890 ZNF720Q7Z2F6 126 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
CPSF7-211ENST00000477890 CMTM8Q8IZV2 173 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 OBSL1O75147 1896 aa12.68□□□□□ -0.38
CPSF7-211ENST00000477890 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 LRP3O75074 770 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 IL18RAPO95256 599 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 ADSSP30520 456 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 HOXC13P31276 330 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 AVPR1AP37288 418 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 POU5F1Q01860 360 aaKnown RBP12.67□□□□□ -0.38
CPSF7-211ENST00000477890 POSTNQ15063 836 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 PTPAQ15257 358 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 USP49Q70CQ1 688 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 CEP68Q76N32 757 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 MAB21L3Q8N8X9 362 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 HVCN1Q96D96 273 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 EPSTI1Q96J88 318 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
CPSF7-211ENST00000477890 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
CPSF7-211ENST00000477890 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 CCDC39Q9UFE4 941 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
CPSF7-211ENST00000477890 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-211ENST00000477890 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-211ENST00000477890 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
CPSF7-211ENST00000477890 PPP1R37O75864 691 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 PNPLA4P41247 253 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 GPR15P49685 360 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 NLRP12P59046 1061 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TFAMQ00059 246 aaKnown RBP12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TSPY1Q01534 308 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 KCNA1Q09470 495 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 BFSP1Q12934 665 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 CSRP2Q16527 193 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TRIM68Q6AZZ1 485 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 STKLD1Q8NE28 680 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 NETO1Q8TDF5 533 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 CNTNAP3BQ96NU0 1288 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 FAM213AQ9BRX8 229 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 CNTNAP3Q9BZ76 1288 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 EBF3Q9H4W6 596 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TMLHEQ9NVH6 421 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 TBC1D7Q9P0N9 293 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 STK17AQ9UEE5 414 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 MAGED2Q9UNF1 606 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-211ENST00000477890 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
CPSF7-211ENST00000477890 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms