RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 DUSP4Q13115 394 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 SLC39A12Q504Y0 691 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 IQCEQ6IPM2 695 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 PARM1Q6UWI2 310 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 TMEM86AQ8N2M4 240 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
PDE6D-204ENST00000477748 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 DTWD2Q8NBA8 298 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 SHDQ96IW2 340 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 ZNF512Q96ME7 567 aaPredicted RBP15.18■□□□□ 0.02
PDE6D-204ENST00000477748 TIGD1Q96MW7 591 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 CORO1BQ9BR76 489 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 ZCWPW1Q9H0M4 648 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 RMND1Q9NWS8 449 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 GDAP2Q9NXN4 497 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 HOOK1Q9UJC3 728 aaKnown RBP15.18■□□□□ 0.02
PDE6D-204ENST00000477748 CA14Q9ULX7 337 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 L1RE1Q9UN81 338 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 SLC27A5Q9Y2P5 690 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 YIPF1Q9Y548 306 aa15.18■□□□□ 0.02
PDE6D-204ENST00000477748 PI15O43692 258 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 GFRA3O60609 400 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 MICAL2O94851 1124 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 SMC2O95347 1197 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 CASP4P49662 377 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 PFKPQ01813 784 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 PLD1Q13393 1074 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
PDE6D-204ENST00000477748 TOP6BLQ8N6T0 577 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 TMEM174Q8WUU8 243 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 ZNF516Q92618 1163 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
PDE6D-204ENST00000477748 ZNF197O14709 1029 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 KINO60870 393 aaKnown RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 PHACTR2O75167 634 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 CST3P01034 146 aaPredicted RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 ALDH1A3P47895 512 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 CDR1P51861 262 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 MYL7Q01449 175 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 TSPY1Q01534 308 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 TRPC3Q13507 836 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 CYP4A22Q5TCH4 519 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 PDZD4Q76G19 769 aaPredicted RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 LRRTM3Q86VH5 581 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 SMYD4Q8IYR2 804 aaPredicted RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 ADGRF2Q8IZF7 708 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 LEMD2Q8NC56 503 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 PLEKHO2Q8TD55 490 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 PARD3BQ8TEW8 1205 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 ING5Q8WYH8 240 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 ERCC4Q92889 916 aaPredicted RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 RPP25Q9BUL9 199 aaKnown RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 DDX43Q9NXZ2 648 aaKnown RBP15.16■□□□□ 0.02
PDE6D-204ENST00000477748 CEP72Q9P209 647 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 FRMD4BQ9Y2L6 1034 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 PCDHA5Q9Y5H7 936 aa15.16■□□□□ 0.02
PDE6D-204ENST00000477748 LRRIQ3A6PVS8 624 aaPredicted RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ABCB7O75027 752 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 GADD45BO75293 160 aaPredicted RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ECI2O75521 394 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 NR2F2P24468 414 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ACAT1P24752 427 aaKnown RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 LHX1P48742 406 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 TUFMP49411 452 aaKnown RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 AP3M2P53677 418 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 EPHB3P54753 998 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 STARD6P59095 220 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 GPC5P78333 572 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 PRKCQQ04759 706 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SMARCB1Q12824 385 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 BIRC3Q13489 604 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ANGPT1Q15389 498 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 NFIL3Q16649 462 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SLC5A9Q2M3M2 681 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SOWAHAQ2M3V2 549 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 MGAT5BQ3V5L5 792 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 PRSS36Q5K4E3 855 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ZNF658Q5TYW1 1059 aaPredicted RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 DPH6Q7L8W6 267 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 OSTM1Q86WC4 334 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 HS6ST3Q8IZP7 471 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ST13P5Q8NFI4 369 aaPredicted RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SPPL2BQ8TCT7 592 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 C2orf15Q8WU43 125 aaKnown RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 MMS19Q96T76 1030 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 SEPT5Q99719 369 aaPredicted RBP15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ACBD6Q9BR61 282 aa15.15■□□□□ 0.02
PDE6D-204ENST00000477748 ASAH2Q9NR71 780 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms