RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 UPP1Q16831 310 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 SYCE1Q8N0S2 351 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
PRPF39-203ENST00000477626 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
PRPF39-203ENST00000477626 A0A0U1RQF3 1178 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 MICAL2O94851 1124 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 TCF4P15884 667 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 AADACL2Q6P093 401 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 FNIP1Q8TF40 1166 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 SLC4A5Q9BY07 1137 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PIN4Q9Y237 131 aaKnown RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 ABCB4P21439 1286 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PTGIRP43119 386 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 ARCQ7LC44 396 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 C3orf20Q8ND61 904 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 SLCO2A1Q92959 643 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PADI3Q9ULW8 664 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 FKTNO75072 461 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PROSCO94903 275 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 NDST1P52848 882 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 LILRA4P59901 499 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 RPL7AP62424 266 aaKnown RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PPP1R2P3Q6NXS1 205 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 C1orf131Q8NDD1 294 aaKnown RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.354e-8■■■■□ 20.1
PRPF39-203ENST00000477626 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
PRPF39-203ENST00000477626 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
PRPF39-203ENST00000477626 ARL5CA6NH57 179 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 C9IYK1 514 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 ENDOD1O94919 500 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 KRT5P13647 590 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 DSC1Q08554 894 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TMEM110Q86TL2 294 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 UNC93AQ86WB7 457 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 CYP11A1P05108 521 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TAS2R40P59535 323 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 C2CD6Q53TS8 623 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 OLFML1Q6UWY5 402 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 ZFP42Q96MM3 310 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 ADPGKQ9BRR6 497 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TMEM30AQ9NV96 361 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 CNOT8Q9UFF9 292 aaKnown RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 DMGDHQ9UI17 866 aaKnown RBP12.88□□□□□ -0.35
PRPF39-203ENST00000477626 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 M0QZQ0 153 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 DNM1LO00429 736 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 PYGMP11217 842 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 ITGA4P13612 1032 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
PRPF39-203ENST00000477626 CDH23Q9H251 3354 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CTAGE8P0CG41 777 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 VDRP11473 427 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CKAP4Q07065 602 aaKnown RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 EIF4EBP2Q13542 120 aaPredicted RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CTAGE6Q86UF2 777 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CTAGE4Q8IX94 777 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 STK32AQ8WU08 396 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CHD9Q3L8U1 2897 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CCDC151A5D8V7 595 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 MIF4GDA9UHW6 222 aaKnown RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 HHLA1C9JL84 531 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 TULP2O00295 520 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 FSCN2O14926 492 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms