RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 BASP1P80723 227 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 UBE2SQ16763 222 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 FIGNQ5HY92 759 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 CCDC81Q6ZN84 652 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 TMEM39BQ9GZU3 492 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 RSPH9Q9H1X1 276 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 NEUROG2Q9H2A3 272 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 C12orf10Q9HB07 376 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 A0A1W2PQ67 120 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 ASNSP08243 561 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 HNRNPH3P31942 346 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 HOXD13P35453 343 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 TECP42680 631 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 STAT2P52630 851 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 AMPD3Q01432 767 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 CYP27A1Q02318 531 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 PPP1R21Q6ZMI0 780 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 GPATCH1Q9BRR8 931 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 ERP44Q9BS26 406 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 NUF2Q9BZD4 464 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 IL20Q9NYY1 176 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 STK17AQ9UEE5 414 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF263O14978 683 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 CCDC22O60826 627 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 CAP2P40123 477 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 CETN2P41208 172 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 PHKA2P46019 1235 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 DNM2P50570 870 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 CHN2P52757 468 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 AP3M2P53677 418 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 JAG1P78504 1218 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 DENND2CQ68D51 928 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 RWDD4Q6NW29 188 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 DCDC5Q6ZRR9 648 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 ANKMY2Q8IV38 441 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 TOR1AIP2Q8NFQ8 470 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 LILRB1Q8NHL6 650 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF507Q8TCN5 953 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 SCFD2Q8WU76 684 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 ATL1Q8WXF7 558 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 STK39Q9UEW8 545 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 DSEQ9UL01 958 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 AK5Q9Y6K8 562 aa13.29□□□□□ -0.28
RTFDC1-207ENST00000477573 A0A1W2PRG0 241 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 PP2D1A8MPX8 630 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CENPBD1B2RD01 187 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 NCK2O43639 380 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ZWINTO95229 277 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CLPTM1O96005 669 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CDC16Q13042 620 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 PDAP1Q13442 181 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 PRKG1Q13976 671 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 FAM47EQ6ZV65 393 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CYP2U1Q7Z449 544 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ADSSL1Q8N142 457 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CALML6Q8TD86 181 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 STAMQ92783 540 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 MAGEB18Q96M61 343 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 TRIM55Q9BYV6 548 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 BLZF1Q9H2G9 400 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ERVK-11Q9UQG0 969 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ALOX15BO15296 676 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 TDP2O95551 362 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 UQCRBP14927 111 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 EEF1GP26641 437 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CASP1P29466 404 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ATICP31939 592 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 NAALADL2Q58DX5 795 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF658Q5TYW1 1059 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 ADGRG6Q86SQ4 1221 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 FMO2Q99518 471 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 B3GNT4Q9C0J1 378 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 CHKBQ9Y259 395 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 STARD13Q9Y3M8 1113 aa13.28□□□□□ -0.28
RTFDC1-207ENST00000477573 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms