RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TMC8Q8IU68 726 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 FNBP1Q96RU3 617 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
PTPN7-209ENST00000477554 PLA2G2FQ9BZM2 168 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.96■□□□□ 0.637e-11■■■■■ 260.8
PTPN7-209ENST00000477554 DDX43Q9NXZ2 648 aaKnown RBP18.96■□□□□ 0.63
PTPN7-209ENST00000477554 KIAA1468Q9P260 1216 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 CDH7Q9ULB5 785 aa18.96■□□□□ 0.63
PTPN7-209ENST00000477554 ANHXE9PGG2 379 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 AKAP3O75969 853 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 PNPLA4P41247 253 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 PRCPP42785 496 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 STXBP5Q5T5C0 1151 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 GPIHBP1Q8IV16 184 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 SLC9A9Q8IVB4 645 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 ADGRF2Q8IZF7 708 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 SLC44A3Q8N4M1 653 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 SEPT5Q99719 369 aaPredicted RBP18.95■□□□□ 0.62
PTPN7-209ENST00000477554 KXD1Q9BQD3 176 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 ABI2Q9NYB9 513 aaPredicted RBP18.95■□□□□ 0.62
PTPN7-209ENST00000477554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTPN7-209ENST00000477554 TRAF3IP3Q9Y228 551 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 KMT2EQ8IZD2 1858 aa18.95■□□□□ 0.62
PTPN7-209ENST00000477554 MYBPHLA2RUH7 354 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 C4BPAP04003 597 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 TRIM49P0CI25 452 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 TRIM49CP0CI26 452 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 CD44P16070 742 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 PTPN2P17706 415 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 BMP6P22004 513 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 VCPP55072 806 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 TDGQ13569 410 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 ZSCAN23Q3MJ62 389 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 METTL23Q86XA0 190 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 SPATA20Q8TB22 786 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 GIPC2Q8TF65 315 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 CCDC47Q96A33 483 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 CGNQ9P2M7 1197 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 GTF3C4Q9UKN8 822 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 DSEQ9UL01 958 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 MRPS23Q9Y3D9 190 aaKnown RBP18.94■□□□□ 0.62
PTPN7-209ENST00000477554 ZNF318Q5VUA4 2279 aa18.94■□□□□ 0.62
PTPN7-209ENST00000477554 TRIM49BA6NDI0 452 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 GABRDO14764 452 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 HUS1O60921 280 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 PDGFRBP09619 1106 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 MYL4P12829 197 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 NR2F2P24468 414 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 RAP1GAPP47736 663 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 CLDN10P78369 228 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 SURF1Q15526 300 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 GUF1Q8N442 669 aaKnown RBP18.93■□□□□ 0.62
PTPN7-209ENST00000477554 SHKBP1Q8TBC3 707 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 PBXIP1Q96AQ6 731 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 CRTAC1Q9NQ79 661 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 RMND1Q9NWS8 449 aa18.93■□□□□ 0.62
PTPN7-209ENST00000477554 CFHP08603 1231 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 FCARP24071 287 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 CYP2F1P24903 491 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 CDH8P55286 799 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 TEAD2Q15562 447 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 MGAT5BQ3V5L5 792 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 SPOPLQ6IQ16 392 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 GAREM2Q75VX8 874 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 RTL10Q7L3V2 364 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 THEM5Q8N1Q8 247 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 TOP6BLQ8N6T0 577 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 GOLGA5Q8TBA6 731 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 TMEM174Q8WUU8 243 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 SDCBP2Q9H190 292 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 DPEP3Q9H4B8 488 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 SMYD3Q9H7B4 428 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 MAN1B1Q9UKM7 699 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 DUSP12Q9UNI6 340 aa18.92■□□□□ 0.62
PTPN7-209ENST00000477554 A0A1W2PRU2 124 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 CALUO43852 315 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 PAX3P23760 479 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 EPHA5P54756 1037 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 PPP3CAQ08209 521 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 INTS6LQ5JSJ4 861 aaKnown RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 TANGO2Q6ICL3 276 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 SASS6Q6UVJ0 657 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 DNAJB7Q7Z6W7 309 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 ZNF512Q96ME7 567 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 MMS19Q96T76 1030 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 OXCT2Q9BYC2 517 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 GTPBP4Q9BZE4 634 aaKnown RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 AVENQ9NQS1 362 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 NXF1Q9UBU9 619 aaKnown RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 ZDBF2Q9HCK1 2354 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 PTPRDP23468 1912 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 SYCE3A1L190 88 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 KRBA1A5PL33 1030 aa18.91■□□□□ 0.62
PTPN7-209ENST00000477554 HAPLN1P10915 354 aaPredicted RBP18.91■□□□□ 0.62
PTPN7-209ENST00000477554 MYO1EQ12965 1108 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms