RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DISP1Q96F81 1524 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 FMN1Q68DA7 1419 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 A0A0B4J269 797 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 ERBB2P04626 1255 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
UBR3-209ENST00000477461 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 TUBB3Q13509 450 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
UBR3-209ENST00000477461 ODF1Q14990 250 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 SRSF7Q16629 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBR3-209ENST00000477461 TMPRSS9Q7Z410 1059 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 ZNF778Q96MU6 729 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 C1orf43Q9BWL3 253 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 BRD9Q9H8M2 597 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 WNT6Q9Y6F9 365 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 PTPRGP23470 1445 aa5.3□□□□□ -1.56
UBR3-209ENST00000477461 AOX1Q06278 1338 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 ARHGEF11O15085 1522 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 ARAP1Q96P48 1450 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 WIPF3A6NGB9 483 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 TTLL1O95922 423 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 GJB1P08034 283 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 WT1P19544 449 aaPredicted RBP5.29□□□□□ -1.56
UBR3-209ENST00000477461 ITPKBP27987 946 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 NDUFV1P49821 464 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 NXPH1P58417 271 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 IGBP1P78318 339 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 KRT85P78386 507 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 POU6F2P78424 691 aaPredicted RBP5.29□□□□□ -1.56
UBR3-209ENST00000477461 DSC2Q02487 901 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 ITIH3Q06033 890 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 EFCAB2Q5VUJ9 269 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 FCRLBQ6BAA4 426 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 POC1BQ8TC44 478 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 HASPINQ8TF76 798 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
UBR3-209ENST00000477461 ACTRT3Q9BYD9 372 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 KMT5AQ9NQR1 393 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 MAN1C1Q9NR34 630 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 AGAP1Q9UPQ3 857 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 PCDHA3Q9Y5H8 950 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 ERCC6L2Q5T890 1561 aa5.29□□□□□ -1.56
UBR3-209ENST00000477461 WASHC2CQ9Y4E1 1318 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 RIMBP3CA6NJZ7 1639 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 RIMBP3BA6NNM3 1639 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 RIMBP3Q9UFD9 1639 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 SHTN1A0MZ66 631 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 PRSS29PA6NIE9 313 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 GABRDO14764 452 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 KIF20AO95235 890 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 PDHA1P08559 390 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 EBLN1P0CF75 366 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 ZNF135P52742 658 aaPredicted RBP5.28□□□□□ -1.56
UBR3-209ENST00000477461 ANAPC15P60006 121 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 TAF2Q6P1X5 1199 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 SLC4A10Q6U841 1118 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 TTC7BQ86TV6 843 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
UBR3-209ENST00000477461 SCAMP4Q969E2 229 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 PADI4Q9UM07 663 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 VPS8Q8N3P4 1428 aa5.28□□□□□ -1.56
UBR3-209ENST00000477461 HECW1Q76N89 1606 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 RAPGEF6Q8TEU7 1601 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 NT5C1B-RDH14C9J2C7 533 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 E7ENX8 843 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 FZD9O00144 591 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 TRIAP1O43715 76 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
UBR3-209ENST00000477461 RPLP2P05387 115 aaKnown RBP5.27□□□□□ -1.57
UBR3-209ENST00000477461 GNAI3P08754 354 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 CCND1P24385 295 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 GNAI1P63096 354 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 TAP2Q03519 686 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
UBR3-209ENST00000477461 HABP2Q14520 560 aaPredicted RBP5.27□□□□□ -1.57
UBR3-209ENST00000477461 TBCCQ15814 346 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 PSD4Q8NDX1 1056 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 SCARB1Q8WTV0 552 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 ANKS1AQ92625 1134 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 RFKQ969G6 155 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 FKBP10Q96AY3 582 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 ETAA1Q9NY74 926 aa5.27□□□□□ -1.57
UBR3-209ENST00000477461 PCF11O94913 1555 aaKnown RBP5.26□□□□□ -1.57
UBR3-209ENST00000477461 CASKIN1Q8WXD9 1431 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 UACAQ9BZF9 1416 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 ANXA1P04083 346 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 PRKCGP05129 697 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 HNRNPCP07910 306 aaKnown RBP eCLIP5.26□□□□□ -1.57
UBR3-209ENST00000477461 CELA2AP08217 269 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 ZFXP17010 805 aaPredicted RBP5.26□□□□□ -1.57
UBR3-209ENST00000477461 CYP2C19P33261 490 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 CCT8P50990 548 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms