RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447		Q8NA96	180 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	MAML1	Q92585	1016 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	APIP	Q96GX9	242 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	BOD1	Q96IK1	185 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	SLC46A1	Q96NT5	459 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	SPATA5L1	Q9BVQ7	753 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	DPH1	Q9BZG8	443 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	BTBD1	Q9H0C5	482 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	NUP62CL	Q9H1M0	184 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	SMOC2	Q9H3U7	446 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	XPR1	Q9UBH6	696 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	AFF4	Q9UHB7	1163 aa	Known RBP	4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	CORO2B	Q9UQ03	480 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	SNX13	Q9Y5W8	968 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447	RAD54B	Q9Y620	910 aa		4.12	□□□□□ -1.75
TARDBP-208	ENST00000477447		A0A087WWL8	130 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	RHPN2P1	A8MT19	583 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	TMEM233	B4DJY2	109 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447		E7ENX8	843 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	NARS	O43776	548 aa	Known RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	ADH4	P08319	380 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	ITGAM	P11215	1152 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	ZKSCAN1	P17029	563 aa	Predicted RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	FDXR	P22570	491 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	NPTX2	P47972	431 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	GCLC	P48506	637 aa	Predicted RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	NDUFV1	P49821	464 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	TOB1	P50616	345 aa	Predicted RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	TAP2	Q03519	686 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	CTBP1	Q13363	440 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	BOP1	Q14137	746 aa	Known RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	MAP9	Q49MG5	647 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	AMOT	Q4VCS5	1084 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	C3orf38	Q5JPI3	329 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	LAYN	Q6UX15	382 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	SESTD1	Q86VW0	696 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	KRT78	Q8N1N4	520 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	POC1B	Q8TC44	478 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	ASB10	Q8WXI3	467 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	HEPH	Q9BQS7	1158 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	WDR11	Q9BZH6	1224 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	UNKL	Q9H9P5	680 aa	Known RBP	4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	SMURF2	Q9HAU4	748 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	TMEM74B	Q9NUR3	256 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	DKK2	Q9UBU2	259 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	HS3ST4	Q9Y661	456 aa		4.11	□□□□□ -1.75
TARDBP-208	ENST00000477447	CCDC194	A0A1B0GVG4	234 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	TRIM43B	A6NCK2	446 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	DCLK1	O15075	740 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	KPNA5	O15131	536 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	ATXN1L	P0C7T5	689 aa	Known RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	SLC5A1	P13866	664 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	PHKG2	P15735	406 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	MCM7	P33993	719 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	VIPR2	P41587	438 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	NEK3	P51956	506 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	ZNF134	P52741	427 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	LILRA4	P59901	499 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	RPS16	P62249	146 aa	Known RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	FMO1	Q01740	532 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	ABHD18	Q0P651	414 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	SCAP	Q12770	1279 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	PICALM	Q13492	652 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	DYRK1A	Q13627	763 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	PTPA	Q15257	358 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	DCAF12L1	Q5VU92	463 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	IL31	Q6EBC2	164 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	TMEM108	Q6UXF1	575 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	MICALCL	Q6ZW33	695 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	TMPRSS9	Q7Z410	1059 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	GPR149	Q86SP6	731 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	GGN	Q86UU5	652 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	LCORL	Q8N3X6	602 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	SSH3	Q8TE77	659 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	RAPGEF4	Q8WZA2	1011 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	NMD3	Q96D46	503 aa	Known RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	MOGAT1	Q96PD6	335 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	KRTAP4-11	Q9BYQ6	195 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	ZNF518B	Q9C0D4	1074 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	SERHL2	Q9H4I8	314 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	INTS13	Q9NVM9	706 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	TBCCD1	Q9NVR7	557 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447	PAXBP1	Q9Y5B6	917 aa		4.1	□□□□□ -1.75
TARDBP-208	ENST00000477447		A0A0B4J269	797 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	ANO9	A1A5B4	782 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447		F5H697	171 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	SOAT2	O75908	522 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	GATA3	P23771	443 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	CD6	P30203	668 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PXN	P49023	591 aa	Predicted RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	LOXL3	P58215	753 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	SATB1	Q01826	763 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	KRT17	Q04695	432 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	TUBB3	Q13509	450 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	HLX	Q14774	488 aa	Predicted RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	IQCB1	Q15051	598 aa		4.09	□□□□□ -1.75

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