RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ADPGKQ9BRR6 497 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 CHST7Q9NS84 486 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 DMAC2Q9NW81 257 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 AGO2Q9UKV8 859 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 NFE2L3Q9Y4A8 694 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
LSM2-212ENST00000477182 CETN3O15182 167 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 OGTO15294 1046 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 EXOC3O60645 756 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 KCNK5O95279 499 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 EFEMP2O95967 443 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 MCF2P10911 925 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 OR1G1P47890 313 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 CXCL12P48061 93 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 CASP4P49662 377 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 SEZ6Q53EL9 994 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 UBXN11Q5T124 520 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 LIN9Q5TKA1 542 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 CEP135Q66GS9 1140 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 APBB1IPQ7Z5R6 666 aaPredicted RBP12.48□□□□□ -0.41
LSM2-212ENST00000477182 SLC9A9Q8IVB4 645 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 CEP120Q8N960 986 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 XXYLT1Q8NBI6 393 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 UBN1Q9NPG3 1134 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
LSM2-212ENST00000477182 FANCLQ9NW38 375 aa12.48□□□□□ -0.41
LSM2-212ENST00000477182 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
LSM2-212ENST00000477182 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 HRO43593 1189 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 EXTL3O43909 919 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 XYLBO75191 536 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 ECI2O75521 394 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 POMCP01189 267 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 ADRB2P07550 413 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 HOXA9P31269 272 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 ACOT2P49753 483 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 OSTNP61366 133 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 MYBPC2Q14324 1141 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 USP41Q3LFD5 358 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 DCAF4L1Q3SXM0 396 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 CBWD2Q8IUF1 395 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 GPD1LQ8N335 351 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 COLEC11Q9BWP8 271 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 THAP9Q9H5L6 903 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 HEBP1Q9NRV9 189 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
LSM2-212ENST00000477182 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 FRMD4BQ9Y2L6 1034 aa12.47□□□□□ -0.41
LSM2-212ENST00000477182 SRRM3A6NNA2 597 aaPredicted RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 GOLGA6L19H0YKK7 550 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 FAM189A1O60320 539 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 AKAP3O75969 853 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 ZNF806P0C7X5 589 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 EPB41P11171 864 aaKnown RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 TNFSF9P41273 254 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 NTHL1P78549 312 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 PPM1LQ5SGD2 360 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 STPG1Q5TH74 334 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 CRELD2Q6UXH1 353 aaPredicted RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 CEP68Q76N32 757 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 LONP2Q86WA8 852 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 FAM186BQ8IYM0 893 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 FAM160A2Q8N612 972 aaPredicted RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 TMEM174Q8WUU8 243 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 CNOT6LQ96LI5 555 aaKnown RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 APOL6Q9BWW8 343 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 HSD3B7Q9H2F3 369 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.41
LSM2-212ENST00000477182 HES2Q9Y543 173 aa12.46□□□□□ -0.41
LSM2-212ENST00000477182 F5P12259 2224 aa12.46□□□□□ -0.42
LSM2-212ENST00000477182 IGF2RP11717 2491 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 SLC16A3O15427 465 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 POU2F2P09086 479 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms