RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 M0R296 226 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 HUS1O60921 280 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 MOSPD3O75425 235 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 KIF20AO95235 890 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 VNN1O95497 513 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 C4BPAP04003 597 aaKnown RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 PTPN2P17706 415 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 ATF6P18850 670 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 MYL6P60660 151 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 SIGLEC14Q08ET2 396 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 HTR4Q13639 388 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 INTS6LQ5JSJ4 861 aaKnown RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 THEM5Q8N1Q8 247 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 FGF14Q92915 247 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 RPP25Q9BUL9 199 aaKnown RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
PRKD3-209ENST00000477132 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
PRKD3-209ENST00000477132 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ATP2C2O75185 946 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 TRIM49P0CI25 452 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 TRIM49CP0CI26 452 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 GJA1P17302 382 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 BMP6P22004 513 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 LMO2P25791 158 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 GPR15P49685 360 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 EPHA5P54756 1037 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 TDGQ13569 410 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 PARM1Q6UWI2 310 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 STKLD1Q8NE28 680 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ACBD6Q9BR61 282 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
PRKD3-209ENST00000477132 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
PRKD3-209ENST00000477132 ZNF318Q5VUA4 2279 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 MAPK13O15264 365 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SMC2O95347 1197 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 STAU1O95793 577 aaKnown RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 MYL4P12829 197 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 COL9A1P20849 921 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 BIRC3Q13489 604 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 ZACNQ401N2 412 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 COBLL1Q53SF7 1204 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 UBALD2Q8IYN6 164 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SLC44A3Q8N4M1 653 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SHKBP1Q8TBC3 707 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 SPPL2BQ8TCT7 592 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 MCRS1Q96EZ8 462 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 PI4K2AQ9BTU6 479 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 ZFP37Q9Y6Q3 630 aaPredicted RBP13.15□□□□□ -0.3
PRKD3-209ENST00000477132 COL4A2P08572 1712 aa13.15□□□□□ -0.3
PRKD3-209ENST00000477132 NCANO14594 1321 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 MAP3K13O43283 966 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 PHACTR2O75167 634 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 FCARP24071 287 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 RAP1GAPP47736 663 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 LHX1P48742 406 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 VAMP7P51809 220 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 UBE2HP62256 183 aa13.14□□□□□ -0.31
PRKD3-209ENST00000477132 MYL7Q01449 175 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms