RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CEACAM1P13688 526 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 ATF6P18850 670 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 CYP3A5P20815 502 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 CDC25CP30307 473 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 GALK1P51570 392 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 MCL1Q07820 350 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 ORC2Q13416 577 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-213ENST00000476777 TRIM29Q14134 588 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 ME3Q16798 604 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 OR10T2Q8NGX3 314 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 NTPCRQ9BSD7 190 aaKnown RBP12.35□□□□□ -0.43
BRCA1-213ENST00000476777 SCNM1Q9BWG6 230 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 C17orf75Q9HAS0 396 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 UBQLN1Q9UMX0 589 aaKnown RBP12.35□□□□□ -0.43
BRCA1-213ENST00000476777 CELSR3Q9NYQ7 3312 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 SFI1A8K8P3 1242 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 E9PMD0 336 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 PPEF2O14830 753 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 APBB3O95704 486 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 CLTAP09496 248 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 ARSAP15289 507 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 CSRP1P21291 193 aaKnown RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 DRD1P21728 446 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 TUFMP49411 452 aaKnown RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 LILRA4P59901 499 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 STRN3Q13033 797 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 VEPH1Q14D04 833 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 FBXO43Q4G163 708 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 NAIF1Q69YI7 327 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 ARMCX5Q6P1M9 558 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 C1orf186Q6ZWK4 172 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 TMEM150AQ86TG1 271 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 C4orf32Q8N8J7 132 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 TMEM161BQ8NDZ6 487 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 EZH1Q92800 747 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 USP13Q92995 863 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 GCNAQ96QF7 691 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 P2RY13Q9BPV8 354 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 LRWD1Q9UFC0 647 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 TBX20Q9UMR3 447 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-213ENST00000476777 ANK1P16157 1881 aa12.34□□□□□ -0.43
BRCA1-213ENST00000476777 SCN1AP35498 2009 aa12.33□□□□□ -0.43
BRCA1-213ENST00000476777 MYH11P35749 1972 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 LACTBL1A8MY62 500 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 CLDN3O15551 220 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 MAPTP10636 758 aaKnown RBP12.33□□□□□ -0.44
BRCA1-213ENST00000476777 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■□□ 19.1
BRCA1-213ENST00000476777 NMT1P30419 496 aaKnown RBP12.33□□□□□ -0.44
BRCA1-213ENST00000476777 AVPR1AP37288 418 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 TNFSF9P41273 254 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 CDR1P51861 262 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 AMPD2Q01433 879 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 DMC1Q14565 340 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 LRSAM1Q6UWE0 723 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 ZPBP2Q6X784 338 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 MAB21L3Q8N8X9 362 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 RPLP0P6Q8NHW5 317 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 SNX29Q8TEQ0 813 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 DNM3Q9UQ16 869 aa12.33□□□□□ -0.44
BRCA1-213ENST00000476777 BPTFQ12830 3046 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 KHNYNO15037 678 aaKnown RBP12.32□□□□□ -0.44
BRCA1-213ENST00000476777 F11P03951 625 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 CYP11A1P05108 521 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 ODC1P11926 461 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 PLS3P13797 630 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 GBP1P32455 592 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 GJA4P35212 333 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 NLRP12P59046 1061 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 RING1Q06587 406 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 BFSP1Q12934 665 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 PDIA5Q14554 519 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRCA1-213ENST00000476777 TTC38Q5R3I4 469 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 KCNK18Q7Z418 384 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 IGSF22Q8N9C0 903 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 GIPC2Q8TF65 315 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms