RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
SEC13-214ENST00000476597 DEPDC1BQ8WUY9 529 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 SCFD1Q8WVM8 642 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 IRF7Q92985 503 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 SEPT5Q99719 369 aaPredicted RBP11.62□□□□□ -0.55
SEC13-214ENST00000476597 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 BLZF1Q9H2G9 400 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 ATXN3LQ9H3M9 355 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 BRD9Q9H8M2 597 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 KIAA1586Q9HCI6 787 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 LTB4R2Q9NPC1 389 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 HEBP1Q9NRV9 189 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 HEPACAM2A8MVW5 462 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 GABRDO14764 452 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 KRT19P08727 400 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 ATF6P18850 670 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 GABRR2P28476 465 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 WEE1P30291 646 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 GDI1P31150 447 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 CDR1P51861 262 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 TSPY1Q01534 308 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 FZD5Q13467 585 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 CUL4BQ13620 913 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 UBXN2BQ14CS0 331 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 VEPH1Q14D04 833 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
SEC13-214ENST00000476597 STXBP5Q5T5C0 1151 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
SEC13-214ENST00000476597 ZNF852Q6ZMS4 543 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 TPRG1Q6ZUI0 275 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 ARID3BQ8IVW6 561 aaPredicted RBP11.61□□□□□ -0.55
SEC13-214ENST00000476597 TOP6BLQ8N6T0 577 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 SPATA18Q8TC71 538 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 FAM200AQ8TCP9 573 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 CLDN23Q96B33 292 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 RSPRY1Q96DX4 576 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 LPIN3Q9BQK8 851 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 MTMR12Q9C0I1 747 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 SLITRK6Q9H5Y7 841 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 TMLHEQ9NVH6 421 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 DDX43Q9NXZ2 648 aaKnown RBP11.61□□□□□ -0.55
SEC13-214ENST00000476597 ZDHHC9Q9Y397 364 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 SNX9Q9Y5X1 595 aa11.61□□□□□ -0.55
SEC13-214ENST00000476597 UBE4BO95155 1302 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 PRR23AA6NEV1 266 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 MAN2B1O00754 1011 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 ZNF263O14978 683 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 CLIC2O15247 247 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 TNNC2P02585 160 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 HMGA1P17096 107 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 CMA1P23946 247 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 AFMP43652 599 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 LHX1P48742 406 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 MYL7Q01449 175 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 FCHO2Q0JRZ9 810 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 BFSP1Q12934 665 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 MYO1EQ12965 1108 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 TAF12Q16514 161 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 BMT2Q1RMZ1 405 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 OSTM1Q86WC4 334 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 WDR49Q8IV35 697 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 NELFCDQ8IXH7 590 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 MAML2Q8IZL2 1156 aaPredicted RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 XXYLT1Q8NBI6 393 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 RDH13Q8NBN7 331 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 HPDLQ96IR7 371 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 PKMYT1Q99640 499 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 PI4K2AQ9BTU6 479 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 TASP1Q9H6P5 420 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 SLC39A2Q9NP94 309 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 GTF3C4Q9UKN8 822 aa11.6□□□□□ -0.55
SEC13-214ENST00000476597 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
SEC13-214ENST00000476597 R3HCC1Q9Y3T6 440 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms