RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 ANKRD63C9JTQ0 380 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 SLC30A4O14863 429 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 NMT1P30419 496 aaKnown RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 TNK2Q07912 1038 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 DMWDQ09019 674 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 KARSQ15046 597 aaKnown RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 CSRP2Q16527 193 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 SV2CQ496J9 727 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 WDR44Q5JSH3 913 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 PRR23CQ6ZRP0 262 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 NT5DC4Q86YG4 428 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 CMTM8Q8IZV2 173 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 FIZ1Q96SL8 496 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 ST6GALNAC4Q9H4F1 302 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 ABI2Q9NYB9 513 aaPredicted RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 AGO2Q9UKV8 859 aaKnown RBP11.7□□□□□ -0.54
CDRT1-205ENST00000475944 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 STYXL1Q9Y6J8 313 aa11.7□□□□□ -0.54
CDRT1-205ENST00000475944 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 IL18RAPO95256 599 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 HAPLN1P10915 354 aaPredicted RBP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 DDX6P26196 483 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 AVPR1AP37288 418 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 PNPLA4P41247 253 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 BFSP1Q12934 665 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 POSTNQ15063 836 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 ZC2HC1CQ53FD0 456 aaPredicted RBP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 WSCD1Q658N2 575 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 LARP1BQ659C4 914 aaKnown RBP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 BRAPQ7Z569 592 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 WDR5BQ86VZ2 330 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 GIPC2Q8TF65 315 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 POMGNT1Q8WZA1 660 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 HVCN1Q96D96 273 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 SLC46A2Q9BY10 475 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 KIF9Q9HAQ2 790 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 GKN1Q9NS71 199 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
CDRT1-205ENST00000475944 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
CDRT1-205ENST00000475944 ANK1P16157 1881 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 CCDC163A0A0D9SF12 145 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 TISP43B9A030 160 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 ATG13O75143 517 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 ADRB1P08588 477 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 CSH1P0DML2 217 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 CSH2P0DML3 217 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 DDIT3P35638 169 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 CDR1P51861 262 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 NLRP12P59046 1061 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 AMPD2Q01433 879 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 TSPY1Q01534 308 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 GRIN1Q05586 938 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 GRSF1Q12849 480 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 RUNX3Q13761 415 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 PPM1JQ5JR12 505 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 ZNF720Q7Z2F6 126 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 LRRTM3Q86VH5 581 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 MAB21L3Q8N8X9 362 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 DDX1Q92499 740 aaKnown RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 MRPS31Q92665 395 aaKnown RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 SMG9Q9H0W8 520 aaKnown RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 TDP1Q9NUW8 608 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 C2orf42Q9NWW7 574 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 SEL1LQ9UBV2 794 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 EXOC7Q9UPT5 735 aa11.68□□□□□ -0.54
CDRT1-205ENST00000475944 KIF26AQ9ULI4 1882 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-205ENST00000475944 TCHHQ07283 1943 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 F11P03951 625 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 SF3A1Q15459 793 aaKnown RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 TMEM196Q5HYL7 178 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 SFR1Q86XK3 245 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 LEO1Q8WVC0 666 aaPredicted RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 GAB3Q8WWW8 586 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 LOXL4Q96JB6 756 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 UPF2Q9HAU5 1272 aaKnown RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 HPS4Q9NQG7 708 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
CDRT1-205ENST00000475944 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms