RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SNX12Q9UMY4 172 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 L1RE1Q9UN81 338 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 COG5Q9UP83 839 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 TTC3P53804 2025 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 DNAH12Q6ZR08 3092 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 CASTOR2A6NHX0 329 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 A8MXQ7 604 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 O00370 1275 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CYB561D2O14569 222 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 BUB1BO60566 1050 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-210ENST00000475329 MICAL2O94851 1124 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CALB1P05937 261 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 FAM163BP0C2L3 166 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CAPN2P17655 700 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 TCP1P17987 556 aaKnown RBP14.58□□□□□ -0.08
TRAF4-210ENST00000475329 WARSP23381 471 aaKnown RBP14.58□□□□□ -0.08
TRAF4-210ENST00000475329 PAX3P23760 479 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CLCNKBP51801 687 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 GPNMBQ14956 572 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CNGA2Q16280 664 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 MEI1Q5TIA1 1274 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 C11orf63Q6NUN7 778 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 MMS22LQ6ZRQ5 1243 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 PEX26Q7Z412 305 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 SLFN11Q7Z7L1 901 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 DAAM2Q86T65 1068 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 MSANTD4Q8NCY6 345 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 MNS1Q8NEH6 495 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 DBF4BQ8NFT6 615 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 KBTBD7Q8WVZ9 684 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 ELAC1Q9H777 363 aaKnown RBP14.58□□□□□ -0.08
TRAF4-210ENST00000475329 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 ATP11BQ9Y2G3 1177 aa14.58□□□□□ -0.08
TRAF4-210ENST00000475329 UQCRHLA0A096LP55 91 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 M0QYV0 167 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 NCK2O43639 380 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 CXCL10P02778 98 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 UQCRHP07919 91 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 PRLRP16471 622 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 MMP8P22894 467 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 GNL1P36915 607 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-210ENST00000475329 UPP1Q16831 310 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 NOMO2Q5JPE7 1267 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 ACOT1Q86TX2 421 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 TMEM86AQ8N2M4 240 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 SENP8Q96LD8 212 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 TLR10Q9BXR5 811 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 PPP1R12CQ9BZL4 782 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 WNT8AQ9H1J5 351 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 TBX21Q9UL17 535 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 SCINQ9Y6U3 715 aa14.57□□□□□ -0.08
TRAF4-210ENST00000475329 ENPP3O14638 875 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 KIF4AO95239 1232 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 FGFR1P11362 822 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 RRM1P23921 792 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 CYP2C18P33260 490 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.081e-10■■■■□ 26.4
TRAF4-210ENST00000475329 AARSP49588 968 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRAF4-210ENST00000475329 CCL23P55773 120 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 CKAP4Q07065 602 aaKnown RBP14.56□□□□□ -0.08
TRAF4-210ENST00000475329 PTP4A2Q12974 167 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 DSTYKQ6XUX3 929 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 ERICH1Q86X53 443 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 CEP112Q8N8E3 955 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 SCLYQ96I15 445 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 TNIP3Q96KP6 325 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 OSBPL9Q96SU4 736 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 TMEM106CQ9BVX2 250 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 MCOLN1Q9GZU1 580 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 MRPL47Q9HD33 250 aaKnown RBP14.56□□□□□ -0.08
TRAF4-210ENST00000475329 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-210ENST00000475329 KANSL3Q9P2N6 904 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 LRFN2Q9ULH4 789 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 STRIP2Q9ULQ0 834 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 NME7Q9Y5B8 376 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 PCDHB7Q9Y5E2 793 aa14.56□□□□□ -0.08
TRAF4-210ENST00000475329 ARHGEF37A1IGU5 675 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 TMEM110-MUSTN1A8MSY1 372 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 HOXA2O43364 376 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 CLTBP09497 229 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 ODC1P11926 461 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 WSCD1Q658N2 575 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 ARHGAP17Q68EM7 881 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 PLEKHA7Q6IQ23 1121 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 NT5DC3Q86UY8 548 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 OSTM1Q86WC4 334 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 ABI1Q8IZP0 508 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 CRYBG2Q8N1P7 616 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms