RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 MAPK6Q16659 721 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 CCDC38Q502W7 563 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 MCEEQ96PE7 176 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 EBF2Q9HAK2 575 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 CPSF3Q9UKF6 684 aaKnown RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 H0YCG3 227 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 A0A087WZ62 844 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 INSRRP14616 1297 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 EPHX2P34913 555 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 ATF7IP2Q5U623 682 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 EXOC3L1Q86VI1 746 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.36e-8■■■□□ 15.9
RNF220-211ENST00000474956 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 XYLT2Q9H1B5 865 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.3
RNF220-211ENST00000474956 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
RNF220-211ENST00000474956 TGFB3P10600 412 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 ETS1P14921 441 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 ASPAP45381 313 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 DENND1BQ6P3S1 775 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 UBR7Q8N806 425 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 CDT1Q9H211 546 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 SIX4Q9UIU6 781 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 GINS2Q9Y248 185 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 OGTO15294 1046 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 SUN1O94901 812 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 PROSCO94903 275 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 UBOX5O94941 541 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 NQO1P15559 274 aaKnown RBP13.15□□□□□ -0.3
RNF220-211ENST00000474956 ATP5DP30049 168 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 ZNF132P52740 706 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 MTM1Q13496 603 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 RAB6CQ53S08 254 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
RNF220-211ENST00000474956 ZFYVE27Q5T4F4 411 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 IER5Q5VY09 327 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
RNF220-211ENST00000474956 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 RAB6CQ9H0N0 254 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
RNF220-211ENST00000474956 FSCN2O14926 492 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 ADCY6O43306 1168 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 LGR5O75473 907 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 ACSL3O95573 720 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.31
RNF220-211ENST00000474956 SLC8A3P57103 927 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.31
RNF220-211ENST00000474956 SERPINB12Q96P63 405 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 PLCD4Q9BRC7 762 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 PTPRHQ9HD43 1115 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 CTNNAL1Q9UBT7 734 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 AGAP1Q9UPQ3 857 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.31
RNF220-211ENST00000474956 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
RNF220-211ENST00000474956 PSEN1P49768 467 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 MCL1Q07820 350 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ZNF699Q32M78 642 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ZPBP2Q6X784 338 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 TAB3Q8N5C8 712 aaPredicted RBP13.14□□□□□ -0.31
RNF220-211ENST00000474956 EMC1Q8N766 993 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 CXCL11O14625 94 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 C22orf31O95567 290 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ALADP13716 330 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 ADORA2AP29274 412 aa13.14□□□□□ -0.31
RNF220-211ENST00000474956 NCALDP61601 193 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms