RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ADSSP30520 456 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 OSTNP61366 133 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC7A5Q01650 507 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 KCNH2Q12809 1159 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 PDAP1Q13442 181 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 NFIL3Q16649 462 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC10A6Q3KNW5 377 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 KLHDC7AQ5VTJ3 777 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SFMBT2Q5VUG0 894 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 DCLRE1AQ6PJP8 1040 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC9A9Q8IVB4 645 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 BRSK2Q8IWQ3 736 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 GSPT2Q8IYD1 628 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 GSTCDQ8NEC7 633 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SPATA4Q8NEY3 305 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 POF1BQ8WVV4 589 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 RIN2Q8WYP3 895 aaPredicted RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 OSBPL9Q96SU4 736 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 LSM14BQ9BX40 385 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 EDEM3Q9BZQ6 932 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 KCTD10Q9H3F6 313 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 AGPAT3Q9NRZ7 376 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 HSPBP1Q9NZL4 362 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 DMGDHQ9UI17 866 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 ADAM28Q9UKQ2 775 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 UBQLN1Q9UMX0 589 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 C2CD2Q9Y426 696 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SF3B1O75533 1304 aaKnown RBP eCLIP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 PLXNA4Q9HCM2 1894 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 SSU72P8A0A1W2PR75 194 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ARHGEF37A1IGU5 675 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ZNF233A6NK53 670 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 HAX1O00165 279 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 RFXAPO00287 272 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CETN3O15182 167 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MAPK13O15264 365 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 GRM6O15303 877 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 PJA2O43164 708 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 TGFB1I1O43294 461 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 TADA2AO75478 443 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 GNA14O95837 355 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 SOD2P04179 222 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CXCL8P10145 99 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 SLC9A1P19634 815 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 NR2F2P24468 414 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 RPL13P26373 211 aaKnown RBP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 LRPAP1P30533 357 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 GGCXP38435 758 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 DNA2P51530 1060 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MNAT1P51948 309 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ENPEPQ07075 957 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 KCNA1Q09470 495 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 RAPGEF1Q13905 1077 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ADGRE1Q14246 886 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 TMEM132DQ14C87 1099 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 NAB2Q15742 525 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MAP9Q49MG5 647 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 DNAJC21Q5F1R6 531 aaKnown RBP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CCDC181Q5TID7 509 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 USP37Q86T82 979 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 TRIM59Q8IWR1 403 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MMGT1Q8N4V1 131 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CEP120Q8N960 986 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 XXYLT1Q8NBI6 393 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MAFAQ8NHW3 353 aaPredicted RBP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 MS4A14Q96JA4 679 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CEP63Q96MT8 703 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 NOX5Q96PH1 765 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ALS2CR12Q96Q35 445 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM213AQ9BRX8 229 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 TLR10Q9BXR5 811 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CXorf56Q9H5V9 222 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ALG13Q9NP73 1137 aaKnown RBP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 ENTPD7Q9NQZ7 604 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 PSD3Q9NYI0 1048 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 RBAKQ9NYW8 714 aaPredicted RBP4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CEP72Q9P209 647 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 DNAJB4Q9UDY4 337 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 COG5Q9UP83 839 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 CEP83Q9Y592 693 aa4.46□□□□□ -1.7
GAPVD1-216ENST00000474637 A0A087X0T9 212 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CASTOR2A6NHX0 329 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 C19orf67A6NJJ6 358 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PODXLO00592 558 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RNF40O75150 1001 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PALMO75781 387 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 C1RP00736 705 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SERPING1P05155 500 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM228BP0C875 321 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CTSAP10619 480 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TCP1P17987 556 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 HOXD13P35453 343 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TNFSF9P41273 254 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PAFAH1B1P43034 410 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 GLUD2P49448 558 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ACOT2P49753 483 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 AFF1P51825 1210 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 AP3M2P53677 418 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RNASE9P60153 205 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 KLHL30Q0D2K2 578 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms