RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SPC25Q9HBM1 224 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 ERVK-5Q9HDB9 667 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 ST7Q9NRC1 585 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 MTRF1LQ9UGC7 380 aaKnown RBP23.03■■□□□ 1.28
CCM2-206ENST00000474617 ADAM21Q9UKJ8 722 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCM2-206ENST00000474617 NR2E1Q9Y466 385 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 NDC80O14777 642 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CA12O43570 354 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 GAS8O95995 478 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 RARAP10276 462 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CYP3A5P20815 502 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 DMTNQ08495 405 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 ZNF394Q53GI3 561 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 ALKAL1Q6UXT8 129 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CROCCP2Q86T23 111 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CCDC105Q8IYK2 499 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 WDTC1Q8N5D0 677 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 C7orf31Q8N865 590 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 IPO4Q8TEX9 1081 aaKnown RBP23.03■■□□□ 1.28
CCM2-206ENST00000474617 SMYD3Q9H7B4 428 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 EFR3BQ9Y2G0 817 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 FAN1Q9Y2M0 1017 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 FAM163BP0C2L3 166 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 PURAQ00577 322 aaKnown RBP23.02■■□□□ 1.28
CCM2-206ENST00000474617 CAV1Q03135 178 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 SNX17Q15036 470 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 CCNG2Q16589 344 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 RSPH3Q86UC2 560 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 CCHCR1Q8TD31 782 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 ZNF560Q96MR9 790 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 OSMRQ99650 979 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 NCAPGQ9BPX3 1015 aa23.02■■□□□ 1.28
CCM2-206ENST00000474617 MTG1Q9BT17 334 aaPredicted RBP23.02■■□□□ 1.28
CCM2-206ENST00000474617 FRMD8P1Q9BZ68 369 aaPredicted RBP23.02■■□□□ 1.28
CCM2-206ENST00000474617 GOLGA6L10A6NI86 522 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 KRT7P08729 469 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 FAM153BP0C7A2 387 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 KCNE1P15382 129 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 GUCY2FP51841 1108 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 EIF3BP55884 814 aaKnown RBP23.01■■□□□ 1.27
CCM2-206ENST00000474617 GJA9P57773 515 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 FAM153CQ494X1 144 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 XKR4Q5GH76 650 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 DENND1BQ6P3S1 775 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 LCLAT1Q6UWP7 414 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 TSEN2Q8NCE0 465 aaKnown RBP23.01■■□□□ 1.27
CCM2-206ENST00000474617 CELF4Q9BZC1 486 aaKnown RBP23.01■■□□□ 1.27
CCM2-206ENST00000474617 SDCBP2Q9H190 292 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 UPF3AQ9H1J1 476 aaKnown RBP23.01■■□□□ 1.27
CCM2-206ENST00000474617 SYNCQ9H7C4 482 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 FAM153AQ9UHL3 310 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 MGAMO43451 1857 aa23.01■■□□□ 1.27
CCM2-206ENST00000474617 M0QZ92 97 aa23■■□□□ 1.27
CCM2-206ENST00000474617 O00370 1275 aa23■■□□□ 1.27
CCM2-206ENST00000474617 PPFIA2O75334 1257 aa23■■□□□ 1.27
CCM2-206ENST00000474617 KRT3P12035 628 aa23■■□□□ 1.27
CCM2-206ENST00000474617 KLF1Q13351 362 aaPredicted RBP23■■□□□ 1.27
CCM2-206ENST00000474617 CCL14Q16627 93 aa23■■□□□ 1.27
CCM2-206ENST00000474617 HADHQ16836 314 aaKnown RBP23■■□□□ 1.27
CCM2-206ENST00000474617 ODF2Q5BJF6 829 aa23■■□□□ 1.27
CCM2-206ENST00000474617 DRICH1Q6PGQ1 229 aaPredicted RBP23■■□□□ 1.27
CCM2-206ENST00000474617 CEP128Q6ZU80 1094 aa23■■□□□ 1.27
CCM2-206ENST00000474617 REM2Q8IYK8 340 aaPredicted RBP23■■□□□ 1.27
CCM2-206ENST00000474617 BBOF1Q8ND07 529 aa23■■□□□ 1.27
CCM2-206ENST00000474617 ATL2Q8NHH9 583 aa23■■□□□ 1.27
CCM2-206ENST00000474617 MCEEQ96PE7 176 aa23■■□□□ 1.27
CCM2-206ENST00000474617 HINFPQ9BQA5 517 aa23■■□□□ 1.27
CCM2-206ENST00000474617 OSBPL8Q9BZF1 889 aa23■■□□□ 1.27
CCM2-206ENST00000474617 TRIM7Q9C029 511 aa23■■□□□ 1.27
CCM2-206ENST00000474617 ELOVL4Q9GZR5 314 aa23■■□□□ 1.27
CCM2-206ENST00000474617 WHRNQ9P202 907 aa23■■□□□ 1.27
CCM2-206ENST00000474617 GOLGA6CA6NDK9 693 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 FAM155AB1AL88 458 aaPredicted RBP22.99■■□□□ 1.27
CCM2-206ENST00000474617 TJP3O95049 919 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 GOLGA6DP0CG33 693 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 CRHR2Q13324 411 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 SLMAPQ14BN4 828 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 PTPN20Q4JDL3 420 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 SCARA3Q6AZY7 606 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 RUFY4Q6ZNE9 571 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 TMC3Q7Z5M5 1100 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 ADAT2Q7Z6V5 191 aaKnown RBP22.99■■□□□ 1.27
CCM2-206ENST00000474617 CCDC50Q8IVM0 306 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 HACE1Q8IYU2 909 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 FAM76AQ8TAV0 307 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 DNAJB3Q8WWF6 145 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 HEXIM2Q96MH2 286 aaKnown RBP22.99■■□□□ 1.27
CCM2-206ENST00000474617 ZIM3Q96PE6 472 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 SNTG2Q9NY99 539 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 GOLGA6AQ9NYA3 693 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 DOCK3Q8IZD9 2030 aa22.99■■□□□ 1.27
CCM2-206ENST00000474617 MICAL2O94851 1124 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 DESP17661 470 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 RAP1GAPP47736 663 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 PSMC1P62191 440 aaKnown RBP22.98■■□□□ 1.27
CCM2-206ENST00000474617 CALCOCO2Q13137 446 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 AADACL2Q6P093 401 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 RPAINQ86UA6 219 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 STK32AQ8WU08 396 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms