RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PAK6Q9NQU5 681 aaPredicted RBP21.01■□□□□ 0.95
SSR1-204ENST00000474597 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSR1-204ENST00000474597 ARL5CA6NH57 179 aa21■□□□□ 0.95
SSR1-204ENST00000474597 M0QYV0 167 aa21■□□□□ 0.95
SSR1-204ENST00000474597 HUS1O60921 280 aa21■□□□□ 0.95
SSR1-204ENST00000474597 MICAL2O94851 1124 aa21■□□□□ 0.95
SSR1-204ENST00000474597 ITIH3Q06033 890 aa21■□□□□ 0.95
SSR1-204ENST00000474597 STILQ15468 1287 aa21■□□□□ 0.95
SSR1-204ENST00000474597 SOWAHAQ2M3V2 549 aa21■□□□□ 0.95
SSR1-204ENST00000474597 UNC93AQ86WB7 457 aa21■□□□□ 0.95
SSR1-204ENST00000474597 NOA1Q8NC60 698 aaKnown RBP21■□□□□ 0.95
SSR1-204ENST00000474597 SPATA4Q8NEY3 305 aa21■□□□□ 0.95
SSR1-204ENST00000474597 WNT8AQ9H1J5 351 aa21■□□□□ 0.95
SSR1-204ENST00000474597 SNX25Q9H3E2 840 aa21■□□□□ 0.95
SSR1-204ENST00000474597 UBN1Q9NPG3 1134 aa21■□□□□ 0.95
SSR1-204ENST00000474597 SMARCAL1Q9NZC9 954 aa21■□□□□ 0.95
SSR1-204ENST00000474597 EHD2Q9NZN4 543 aa21■□□□□ 0.95
SSR1-204ENST00000474597 STRIP2Q9ULQ0 834 aa21■□□□□ 0.95
SSR1-204ENST00000474597 A8MXQ7 604 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 DDX3YO15523 660 aaKnown RBP20.99■□□□□ 0.95
SSR1-204ENST00000474597 MAMLD1Q13495 774 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 MTFR1Q15390 333 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 PLEKHA7Q6IQ23 1121 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 CCDC70Q6NSX1 233 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 WDTC1Q8N5D0 677 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 TSPYL2Q9H2G4 693 aaPredicted RBP20.99■□□□□ 0.95
SSR1-204ENST00000474597 TDRD15B5MCY1 1934 aaKnown RBP20.99■□□□□ 0.95
SSR1-204ENST00000474597 O00370 1275 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 RHOXF2BP0C7M4 288 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 CCL5P13501 91 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 SCNN1GP51170 649 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 LILRA4P59901 499 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 RNASE9P60153 205 aaKnown RBP20.99■□□□□ 0.95
SSR1-204ENST00000474597 LLGL2Q6P1M3 1020 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 DNAJC24Q6P3W2 148 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 ACOT1Q86TX2 421 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 RHOXF2Q9BQY4 288 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 SYNCQ9H7C4 482 aa20.99■□□□□ 0.95
SSR1-204ENST00000474597 ARGLU1Q9NWB6 273 aaPredicted RBP20.99■□□□□ 0.95
SSR1-204ENST00000474597 SPTLC1O15269 473 aa20.98■□□□□ 0.95
SSR1-204ENST00000474597 RBM10P98175 930 aaKnown RBP20.98■□□□□ 0.95
SSR1-204ENST00000474597 BFSP2Q13515 415 aa20.98■□□□□ 0.95
SSR1-204ENST00000474597 GSTCDQ8NEC7 633 aa20.98■□□□□ 0.95
SSR1-204ENST00000474597 EPC1Q9H2F5 836 aa20.98■□□□□ 0.95
SSR1-204ENST00000474597 MIOSQ9NXC5 875 aa20.98■□□□□ 0.95
SSR1-204ENST00000474597 PGRMC1O00264 195 aaKnown RBP20.97■□□□□ 0.95
SSR1-204ENST00000474597 GNL1P36915 607 aaPredicted RBP20.97■□□□□ 0.95
SSR1-204ENST00000474597 SLC1A1P43005 524 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 CDK7P50613 346 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 TRAF7Q6Q0C0 670 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 LCLAT1Q6UWP7 414 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 LRRC8DQ7L1W4 858 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 ECHDC2Q86YB7 292 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 TOP6BLQ8N6T0 577 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 FEZF2Q8TBJ5 459 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 ACTRT1Q8TDG2 376 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 CARD9Q9H257 536 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 TSPAN16Q9UKR8 245 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 CCDC66A2RUB6 948 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 SELPP16109 830 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 TAP1Q03518 808 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 PTPN20Q4JDL3 420 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 DCUN1D2Q6PH85 259 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 ADGRF2Q8IZF7 708 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 C12orf29Q8N999 325 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.97■□□□□ 0.95
SSR1-204ENST00000474597 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.97■□□□□ 0.952e-18■■□□□ 12.7
SSR1-204ENST00000474597 RGS18Q9NS28 235 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 RNF216Q9NWF9 866 aaPredicted RBP20.97■□□□□ 0.95
SSR1-204ENST00000474597 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 HESX1Q9UBX0 185 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 L1RE1Q9UN81 338 aa20.97■□□□□ 0.95
SSR1-204ENST00000474597 PODXLO00592 558 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 CYB561D2O14569 222 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 AFF1P51825 1210 aaKnown RBP20.96■□□□□ 0.95
SSR1-204ENST00000474597 GOLGA7BQ2TAP0 167 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 CYP4A22Q5TCH4 519 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 FAM126BQ8IXS8 530 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 MMGT1Q8N4V1 131 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 UBA3Q8TBC4 463 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 C18orf8Q96DM3 657 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 PARD6BQ9BYG5 372 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 WDR35Q9P2L0 1181 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 LCMT1Q9UIC8 334 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 OGDHLQ9ULD0 1010 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 INPP5FQ9Y2H2 1132 aa20.96■□□□□ 0.95
SSR1-204ENST00000474597 PDGFRBP09619 1106 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 CTNNA2P26232 953 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 RPL9P32969 192 aaKnown RBP20.95■□□□□ 0.94
SSR1-204ENST00000474597 CLUL1Q15846 466 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 PPP1R26Q5T8A7 1209 aaPredicted RBP20.95■□□□□ 0.94
SSR1-204ENST00000474597 RASGEF1CQ8N431 466 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 C3orf20Q8ND61 904 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 IPO4Q8TEX9 1081 aaKnown RBP20.95■□□□□ 0.94
SSR1-204ENST00000474597 KBTBD7Q8WVZ9 684 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 TRIM7Q9C029 511 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 MIS12Q9H081 205 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 ANKZF1Q9H8Y5 726 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 FAM49BQ9NUQ9 324 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 IP6K2Q9UHH9 426 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms