RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SOX9P48436 509 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 KPNA1P52294 538 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SCARA3Q6AZY7 606 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 DHX58Q96C10 678 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 PI4K2AQ9BTU6 479 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 STRA6Q9BX79 667 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 LMAN1LQ9HAT1 526 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 MAGED2Q9UNF1 606 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 ASB3Q9Y575 518 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SHISA7A6NL88 538 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 TMEM191BP0C7N4 346 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 GARTP22102 1010 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 PAX3P23760 479 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 MAGEA9P43362 315 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 ID4P47928 161 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 GPR15P49685 360 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 ASIC1P78348 528 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 TSPY1Q01534 308 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 MTAPQ13126 283 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 SDHAF4Q5VUM1 108 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 DCP1BQ8IZD4 617 aaKnown RBP12.87□□□□□ -0.35
SMPD4-217ENST00000473720 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-217ENST00000473720 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 TRPV4Q9HBA0 871 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 TMLHEQ9NVH6 421 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 FBXO4Q9UKT5 387 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
SMPD4-217ENST00000473720 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 KIAA1549LQ6ZVL6 1849 aa12.87□□□□□ -0.35
SMPD4-217ENST00000473720 CHADO15335 359 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 EXTL3O43909 919 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 HUS1O60921 280 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 PRAMEF12O95522 483 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 FGF19O95750 216 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 PNPLA4P41247 253 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 RPS9P46781 194 aaKnown RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 FZD5Q13467 585 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 ALCAMQ13740 583 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 MKNK1Q9BUB5 465 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
SMPD4-217ENST00000473720 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
SMPD4-217ENST00000473720 FRMD3A2A2Y4 597 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 HCRTO43612 131 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 CASP1P29466 404 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 CDC25CP30307 473 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
SMPD4-217ENST00000473720 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 ZNF528Q3MIS6 628 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
SMPD4-217ENST00000473720 LRRC3BQ96PB8 259 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 L1RE1Q9UN81 338 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
SMPD4-217ENST00000473720 ARNTLO00327 626 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 CLIC2O15247 247 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 CUTAO60888 179 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 PPP6R2O75170 966 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 TNNC2P02585 160 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 CYP2F1P24903 491 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 RBP5P82980 135 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 MYL7Q01449 175 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms