RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PGBD4Q96DM1 585 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 PPP1R10Q96QC0 940 aaKnown RBP15.74■□□□□ 0.11
LMNA-213ENST00000473598 GAD1Q99259 594 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 NXF1Q9UBU9 619 aaKnown RBP15.74■□□□□ 0.11
LMNA-213ENST00000473598 POLIQ9UNA4 740 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 PCDHB4Q9Y5E5 795 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 PCDHA13Q9Y5I0 950 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 LTBP2Q14767 1821 aa15.74■□□□□ 0.11
LMNA-213ENST00000473598 ANO9A1A5B4 782 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 TIMP1P01033 207 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 CYP11B1P15538 503 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 PLEKHG4Q58EX7 1191 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 C9orf57Q5W0N0 161 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 ECHDC2Q86YB7 292 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 LRRC52Q8N7C0 313 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 SLC30A5Q8TAD4 765 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 AGPAT1Q99943 283 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 NOCTQ9UK39 431 aaKnown RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 C9IYK1 514 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 DDX3XO00571 662 aaKnown RBP eCLIP15.73■□□□□ 0.11
LMNA-213ENST00000473598 PIRO00625 290 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 PPEF2O14830 753 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 P4HA1P13674 534 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 PDE6CP51160 858 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 SOX4Q06945 474 aaPredicted RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 KIF5AQ12840 1032 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 CASP8Q14790 479 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 TMEM270Q6UE05 265 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 SCARA5Q6ZMJ2 495 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 NOP9Q86U38 636 aaKnown RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 LNX1Q8TBB1 728 aaPredicted RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 SLC20A1Q8WUM9 679 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 LINC01599Q8WXQ3 324 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 TSGA10Q9BZW7 698 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
LMNA-213ENST00000473598 ANKZF1Q9H8Y5 726 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 RSAD1Q9HA92 442 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 UBN1Q9NPG3 1134 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 ACP6Q9NPH0 428 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 CISHQ9NSE2 258 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 ETAA1Q9NY74 926 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 NENFQ9UMX5 172 aa15.73■□□□□ 0.11
LMNA-213ENST00000473598 FSBPO95073 299 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 PARNO95453 639 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 THP07101 528 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 WEE2P0C1S8 567 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 CSF2RAP15509 400 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 TNFAIP3P21580 790 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 MAGEA1P43355 309 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 BPIFB4P59827 614 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 YWHAEP62258 255 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 AP1ARQ63HQ0 302 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 GLYCTKQ8IVS8 523 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 RNF169Q8NCN4 708 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 DBF4BQ8NFT6 615 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 SH3GL3Q99963 347 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 GOLGA2P5Q9HBQ8 144 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 LUC7LQ9NQ29 371 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 SLC38A7Q9NVC3 462 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 MIOSQ9NXC5 875 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 DUSP10Q9Y6W6 482 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 EOMESO95936 686 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 CD58P19256 250 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 PAX7P23759 505 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 LRPAP1P30533 357 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 MAGEA10P43363 369 aaPredicted RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 AFF1P51825 1210 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 ZNF132P52740 706 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 FAM189BP81408 668 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 NAB2Q15742 525 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 WHAMMP3Q1A5X7 153 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 C10orf76Q5T2E6 689 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 SPATS2Q86XZ4 545 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 RPUSD2Q8IZ73 545 aaKnown RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 OTUD6BQ8N6M0 293 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 RBBP8NLQ8NC74 664 aaPredicted RBP15.72■□□□□ 0.11
LMNA-213ENST00000473598 SEPT8Q92599 483 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 APBB2Q92870 758 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 CYP3A43Q9HB55 503 aa15.72■□□□□ 0.11
LMNA-213ENST00000473598 CHRNB2P17787 502 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 IBSPP21815 317 aaPredicted RBP15.71■□□□□ 0.11
LMNA-213ENST00000473598 SCNN1GP51170 649 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 TNNC1P63316 161 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 MFSD5Q6N075 450 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
LMNA-213ENST00000473598 VWCEQ96DN2 955 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 PLEKHA4Q9H4M7 779 aa15.71■□□□□ 0.11
LMNA-213ENST00000473598 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
LMNA-213ENST00000473598 PJA2O43164 708 aa15.7■□□□□ 0.1
LMNA-213ENST00000473598 RNF40O75150 1001 aa15.7■□□□□ 0.1
LMNA-213ENST00000473598 RTN2O75298 545 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms