RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 PCDHGA7Q9Y5G6 932 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 PCDHGA6Q9Y5G7 932 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 PCDHGA3Q9Y5H0 932 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
GINS1-202ENST00000473460 TLDC2A0PJX2 215 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 ZNF785A8K8V0 405 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 PPEF2O14830 753 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 ADAMTS3O15072 1205 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 TUBB4AP04350 444 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 FAM163BP0C2L3 166 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 CHRM3P20309 590 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 HSD3B2P26439 372 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 SLC16A1P53985 500 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 FOXG1P55316 489 aaPredicted RBP4.37□□□□□ -1.71
GINS1-202ENST00000473460 TCF15Q12870 199 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 AWAT2Q6E213 333 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 CNTD1Q8N815 330 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 NSUN6Q8TEA1 469 aaKnown RBP4.37□□□□□ -1.71
GINS1-202ENST00000473460 RGMAQ96B86 450 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 COA7Q96BR5 231 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 GPR35Q9HC97 309 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 RLIMQ9NVW2 624 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 SIDT1Q9NXL6 827 aaKnown RBP4.37□□□□□ -1.71
GINS1-202ENST00000473460 SERPINB13Q9UIV8 391 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 TBC1D30Q9Y2I9 924 aa4.37□□□□□ -1.71
GINS1-202ENST00000473460 PRRT4C9JH25 899 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 SMIM22K7EJ46 135 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 PPM1DO15297 605 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 GJB1P08034 283 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 NDUFB7P17568 137 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 CD6P30203 668 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 ZNF135P52742 658 aaPredicted RBP4.36□□□□□ -1.71
GINS1-202ENST00000473460 DSC2Q02487 901 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 FHL1Q13642 323 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 KHDC1Q4VXA5 237 aaKnown RBP4.36□□□□□ -1.71
GINS1-202ENST00000473460 ANKRD16Q6P6B7 361 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 PGM2L1Q6PCE3 622 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 ZNF517Q6ZMY9 492 aaPredicted RBP4.36□□□□□ -1.71
GINS1-202ENST00000473460 BRIP1Q9BX63 1249 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 BRD9Q9H8M2 597 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 DLL3Q9NYJ7 618 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 ELOVL5Q9NYP7 299 aa4.36□□□□□ -1.71
GINS1-202ENST00000473460 VPS4BO75351 444 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 SOAT2O75908 522 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 NXPH3O95157 252 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 KIF20AO95235 890 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 ITGALP20701 1170 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 CNGA1P29973 690 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 CYP2C19P33261 490 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 NR4A2P43354 598 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 BOP1Q14137 746 aaKnown RBP4.35□□□□□ -1.71
GINS1-202ENST00000473460 AARS2Q5JTZ9 985 aaKnown RBP4.35□□□□□ -1.71
GINS1-202ENST00000473460 PPP4R3AQ6IN85 833 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 SLC4A10Q6U841 1118 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 SLC29A4Q7RTT9 530 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 MAVSQ7Z434 540 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 PPP1R32Q7Z5V6 425 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 ATRIPQ8WXE1 791 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 CAMKK2Q96RR4 588 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 CNPPD1Q9BV87 410 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 ANLNQ9NQW6 1124 aa4.35□□□□□ -1.71
GINS1-202ENST00000473460 SMIM35A0A1B0GVV1 85 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 FZD9O00144 591 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 CHEK2O96017 543 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 MT-CO1P00395 513 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 LIPAP38571 399 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 CCT4P50991 539 aaKnown RBP4.34□□□□□ -1.71
GINS1-202ENST00000473460 FXR1P51114 621 aaKnown RBP eCLIP4.34□□□□□ -1.71
GINS1-202ENST00000473460 KIF23Q02241 960 aaPredicted RBP4.34□□□□□ -1.71
GINS1-202ENST00000473460 ACAP2Q15057 778 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 ZNF618Q5T7W0 954 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 CATSPERGQ6ZRH7 1159 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 FAM90A1Q86YD7 464 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 FANCBQ8NB91 859 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 ATL2Q8NHH9 583 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 FAXDC2Q96IV6 333 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 MACROD1Q9BQ69 325 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 MKS1Q9NXB0 559 aa4.34□□□□□ -1.71
GINS1-202ENST00000473460 CFAP20Q9Y6A4 193 aaKnown RBP4.34□□□□□ -1.71
GINS1-202ENST00000473460 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 DNAJB5O75953 348 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 GNAI3P08754 354 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 PRDX5P30044 214 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 PHKA1P46020 1223 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 GCLCP48506 637 aaPredicted RBP4.33□□□□□ -1.72
GINS1-202ENST00000473460 CLCN2P51788 898 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 EEFSECP57772 596 aaKnown RBP4.33□□□□□ -1.72
GINS1-202ENST00000473460 GNAI1P63096 354 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 SP2Q02086 613 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 KIF22Q14807 665 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
GINS1-202ENST00000473460 KLHL22Q53GT1 634 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 SDE2Q6IQ49 451 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 WDR53Q7Z5U6 358 aaPredicted RBP4.33□□□□□ -1.72
GINS1-202ENST00000473460 DTX2Q86UW9 622 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 CHSY1Q86X52 802 aa4.33□□□□□ -1.72
GINS1-202ENST00000473460 C8orf58Q8NAV2 365 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms