RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CCDC192P0DO97 292 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
TRAF4-209ENST00000473421 CYP3A5P20815 502 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 WEE1P30291 646 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAF4-209ENST00000473421 MCM2P49736 904 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 GALK1P51570 392 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 RUNX3Q13761 415 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 CCDC142Q17RM4 750 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 C9orf57Q5W0N0 161 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 KRT79Q5XKE5 535 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 C1orf228Q6PIY5 440 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 LOXL4Q96JB6 756 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 ZC3H10Q96K80 434 aaKnown RBP13.68□□□□□ -0.22
TRAF4-209ENST00000473421 FAM84AQ96KN4 292 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 C17orf75Q9HAS0 396 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 WASF3Q9UPY6 502 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 ASB3Q9Y575 518 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 BAHCC1Q9P281 2608 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 ANKRD63C9JTQ0 380 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 F11P03951 625 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 TRAPPC10P48553 1259 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 NCKAP1LP55160 1127 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 NLRP12P59046 1061 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 PPP2R3AQ06190 1150 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 HAUS6Q7Z4H7 955 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-209ENST00000473421 DDX1Q92499 740 aaKnown RBP13.67□□□□□ -0.22
TRAF4-209ENST00000473421 SLC22A12Q96S37 553 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.67□□□□□ -0.22
TRAF4-209ENST00000473421 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-209ENST00000473421 SLC8A2Q9UPR5 921 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 IGF2RP11717 2491 aa13.67□□□□□ -0.22
TRAF4-209ENST00000473421 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
TRAF4-209ENST00000473421 A0A0B4J269 797 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 C4orf47A7E2U8 309 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 PATE3B3GLJ2 98 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 TADA3O75528 432 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 CYP11A1P05108 521 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 PROS1P07225 676 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-209ENST00000473421 ACOT2P49753 483 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 WNT7BP56706 349 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 HYIQ5T013 277 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 BICD1Q96G01 975 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 CYP2S1Q96SQ9 504 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-209ENST00000473421 OXCT2Q9BYC2 517 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-209ENST00000473421 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
TRAF4-209ENST00000473421 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
TRAF4-209ENST00000473421 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 ZFYVE26Q68DK2 2539 aa13.66□□□□□ -0.22
TRAF4-209ENST00000473421 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 CYB561D2O14569 222 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 OGTO15294 1046 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 HCRTO43612 131 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 FOXD2O60548 495 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 ODC1P11926 461 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 GJA4P35212 333 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 CREB5Q02930 508 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 GRSF1Q12849 480 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 ITIH5Q86UX2 942 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 ZSWIM2Q8NEG5 633 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 RPLP0P6Q8NHW5 317 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 FIZ1Q96SL8 496 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 PYM1Q9BRP8 204 aaKnown RBP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
TRAF4-209ENST00000473421 LIMCH1Q9UPQ0 1083 aa13.65□□□□□ -0.22
TRAF4-209ENST00000473421 KIAA1549LQ6ZVL6 1849 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 NUP205Q92621 2012 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 LNP1A1A4G5 178 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 BCLAF3A2AJT9 711 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 FGF19O95750 216 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 PIGRP01833 764 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 BCKDHBP21953 392 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 CDC25CP30307 473 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 PRPHP41219 470 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 LIG4P49917 911 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 NOVA1P51513 510 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 SMTNP53814 917 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms