RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 TOP6BLQ8N6T0 577 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 DEPDC1BQ8WUY9 529 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 NELL2Q99435 816 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 FOXQ1Q9C009 403 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 TULP1O00294 542 aaPredicted RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 ACTN4O43707 911 aaKnown RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 SOAT2O75908 522 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 TNNC2P02585 160 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 DCNP07585 359 aaKnown RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 KRT19P08727 400 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 ATF6P18850 670 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 BFSP1Q12934 665 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 MYO1EQ12965 1108 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 VEPH1Q14D04 833 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 SNRNP35Q16560 246 aaKnown RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 MGAT5BQ3V5L5 792 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 VITQ6UXI7 678 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 C12orf56Q8IXR9 622 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 XXYLT1Q8NBI6 393 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 OR5B17Q8NGF7 314 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 LEO1Q8WVC0 666 aaPredicted RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 IRF7Q92985 503 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 FAM84AQ96KN4 292 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 SEPT5Q99719 369 aaPredicted RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 BRD9Q9H8M2 597 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 ZNF334Q9HCZ1 680 aaPredicted RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 USP25Q9UHP3 1055 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 SERTAD1Q9UHV2 236 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 R3HCC1Q9Y3T6 440 aaKnown RBP22.32■■□□□ 1.16
EPHB3-202ENST00000473079 PCDHB5Q9Y5E4 795 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 SNX9Q9Y5X1 595 aa22.32■■□□□ 1.16
EPHB3-202ENST00000473079 PTPRJQ12913 1337 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 GABRDO14764 452 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 GLULP15104 373 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 WEE1P30291 646 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 VIPR2P41587 438 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 LHX1P48742 406 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 KRT85P78386 507 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 MYL7Q01449 175 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 PAGE5Q96GU1 130 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 HPDLQ96IR7 371 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 MKNK1Q9BUB5 465 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 ABCB6Q9NP58 842 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 SLC39A2Q9NP94 309 aa22.31■■□□□ 1.16
EPHB3-202ENST00000473079 DDX43Q9NXZ2 648 aaKnown RBP22.31■■□□□ 1.16
EPHB3-202ENST00000473079 KLRC4O43908 158 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 PRPF40AO75400 957 aaKnown RBP22.3■■□□□ 1.16
EPHB3-202ENST00000473079 MYL1P05976 194 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 GABRR2P28476 465 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 PSMD2Q13200 908 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 GRM2Q14416 872 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 PSMD6Q15008 389 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 KNOP1Q1ED39 458 aaKnown RBP22.3■■□□□ 1.16
EPHB3-202ENST00000473079 SOWAHAQ2M3V2 549 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 INTS6LQ5JSJ4 861 aaKnown RBP22.3■■□□□ 1.16
EPHB3-202ENST00000473079 LMBRD2Q68DH5 695 aaPredicted RBP22.3■■□□□ 1.16
EPHB3-202ENST00000473079 NELFCDQ8IXH7 590 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 FAM200AQ8TCP9 573 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 TMEM174Q8WUU8 243 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 PKMYT1Q99640 499 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 LPIN3Q9BQK8 851 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 ATXN3LQ9H3M9 355 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 SLITRK6Q9H5Y7 841 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 IL21Q9HBE4 155 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 LTB4R2Q9NPC1 389 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 TMLHEQ9NVH6 421 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 ABI2Q9NYB9 513 aaPredicted RBP22.3■■□□□ 1.16
EPHB3-202ENST00000473079 HPSEQ9Y251 543 aa22.3■■□□□ 1.16
EPHB3-202ENST00000473079 FAM237AA0A1B0GTK4 181 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 FAM170BA6NMN3 283 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 HEPACAM2A8MVW5 462 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 CLIC2O15247 247 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 PFKFB1P16118 471 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 PCSK1P29120 753 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 CDC25CP30307 473 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 MAGEA9P43362 315 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 MLLT6P55198 1093 aaPredicted RBP22.29■■□□□ 1.16
EPHB3-202ENST00000473079 CYP24A1Q07973 514 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 ARHGAP15Q53QZ3 475 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 ZNF852Q6ZMS4 543 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 TRAPPC11Q7Z392 1133 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 C1orf210Q8IVY1 113 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 GRAMD1CQ8IYS0 662 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 ADGRF2Q8IZF7 708 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 RDH13Q8NBN7 331 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 GOLGA5Q8TBA6 731 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 CLDN23Q96B33 292 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 BCO2Q9BYV7 579 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 HEBP1Q9NRV9 189 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 OBP2AQ9NY56 170 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 ZMYM5Q9UJ78 669 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 MRPS17Q9Y2R5 130 aaKnown RBP22.29■■□□□ 1.16
EPHB3-202ENST00000473079 MTF2Q9Y483 593 aaPredicted RBP22.29■■□□□ 1.16
EPHB3-202ENST00000473079 ATP6V1DQ9Y5K8 247 aa22.29■■□□□ 1.16
EPHB3-202ENST00000473079 A0A1B0GVL5 298 aa22.28■■□□□ 1.16
EPHB3-202ENST00000473079 SHISA7A6NL88 538 aa22.28■■□□□ 1.16
EPHB3-202ENST00000473079 GFRA3O60609 400 aa22.28■■□□□ 1.16
EPHB3-202ENST00000473079 LRRN2O75325 713 aa22.28■■□□□ 1.16
EPHB3-202ENST00000473079 FAM163BP0C2L3 166 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms