RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 WEE1P30291 646 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 HOXD13P35453 343 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 AMPD3Q01432 767 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 FCHO2Q0JRZ9 810 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
VTI1A-203ENST00000472892 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 LRRC52Q8N7C0 313 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 IL21Q9HBE4 155 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 GDAP2Q9NXN4 497 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 TSC2P49815 1807 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 CACNA1IQ9P0X4 2223 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 CHADO15335 359 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 CDR1P51861 262 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 RBP5P82980 135 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 VEPH1Q14D04 833 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 ARHGAP15Q53QZ3 475 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 MAMSTRQ6ZN01 415 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-203ENST00000472892 TMEM86AQ8N2M4 240 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 FAM200AQ8TCP9 573 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 FAM3CQ92520 227 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 DHX58Q96C10 678 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 LRRC3BQ96PB8 259 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 C7orf25Q9BPX7 421 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 TASP1Q9H6P5 420 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 TMLHEQ9NVH6 421 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 OBP2AQ9NY56 170 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 SIX4Q9UIU6 781 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 L1RE1Q9UN81 338 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 PCDHB5Q9Y5E4 795 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 PIAS3Q9Y6X2 628 aa16.46■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF233A6NK53 670 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
VTI1A-203ENST00000472892 EIF3DO15371 548 aaKnown RBP eCLIP16.45■□□□□ 0.22
VTI1A-203ENST00000472892 HUS1O60921 280 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
VTI1A-203ENST00000472892 TSPY1Q01534 308 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 SURF1Q15526 300 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 NFE2Q16621 373 aaPredicted RBP16.45■□□□□ 0.22
VTI1A-203ENST00000472892 GPR158Q5T848 1215 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 GPIHBP1Q8IV16 184 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 YAF2Q8IY57 180 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 SPATA18Q8TC71 538 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 KCNG4Q8TDN1 519 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 NELL1Q92832 810 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 FAM84AQ96KN4 292 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 INTS13Q9NVM9 706 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 ABI2Q9NYB9 513 aaPredicted RBP16.45■□□□□ 0.22
VTI1A-203ENST00000472892 MIA3Q5JRA6 1907 aa16.45■□□□□ 0.22
VTI1A-203ENST00000472892 FAM186AA6NE01 2351 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 GABRDO14764 452 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 F13A1P00488 732 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 KRT19P08727 400 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 HMGA1P17096 107 aaKnown RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 CDC25CP30307 473 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 ASIC1P78348 528 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 CSTF1Q05048 431 aaKnown RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 EHHADHQ08426 723 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 TAF12Q16514 161 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 FOXD4L5Q5VV16 416 aaPredicted RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 CBWD2Q8IUF1 395 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 HSCBQ8IWL3 235 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 TOP6BLQ8N6T0 577 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 CSGALNACT1Q8TDX6 532 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 NOC3LQ8WTT2 800 aaKnown RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 LEO1Q8WVC0 666 aaPredicted RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 FOXD4L4Q8WXT5 416 aaPredicted RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 PKMYT1Q99640 499 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 SLC46A2Q9BY10 475 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 MTMR12Q9C0I1 747 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 MAGEF1Q9HAY2 307 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 DDX43Q9NXZ2 648 aaKnown RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 HSPBP1Q9NZL4 362 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 ZMYM5Q9UJ78 669 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 NDRG2Q9UN36 371 aaKnown RBP16.44■□□□□ 0.22
VTI1A-203ENST00000472892 PCDHA7Q9UN72 937 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 SNX9Q9Y5X1 595 aa16.44■□□□□ 0.22
VTI1A-203ENST00000472892 COL4A2P08572 1712 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 DPYSL4O14531 572 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 POLR2DO15514 142 aaKnown RBP16.43■□□□□ 0.22
VTI1A-203ENST00000472892 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 TMEM191BP0C7N4 346 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 LHX1P48742 406 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 MYL7Q01449 175 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 BFSP1Q12934 665 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 MTAPQ13126 283 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 INTS6LQ5JSJ4 861 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms