RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GCNT1Q02742 428 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 SKIV2LQ15477 1246 aaKnown RBP21.35■■□□□ 1.01
SF1-213ENST00000472725 INTS6LQ5JSJ4 861 aaKnown RBP21.35■■□□□ 1.01
SF1-213ENST00000472725 CYP26C1Q6V0L0 522 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 CCDC149Q6ZUS6 474 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 OSTM1Q86WC4 334 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 PALB2Q86YC2 1186 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 OR6B3Q8NGW1 331 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 OR10T2Q8NGX3 314 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 HLA-CQ95604 372 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 TNIP3Q96KP6 325 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 MRPL45Q9BRJ2 306 aaKnown RBP21.35■■□□□ 1.01
SF1-213ENST00000472725 SMYD3Q9H7B4 428 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 CLDND1Q9NY35 253 aa21.35■■□□□ 1.01
SF1-213ENST00000472725 BARX2Q9UMQ3 279 aaPredicted RBP21.35■■□□□ 1.01
SF1-213ENST00000472725 EPCAMP16422 314 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 HOXA9P31269 272 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 ELF1P32519 619 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 COPB1P53618 953 aaKnown RBP21.34■■□□□ 1.01
SF1-213ENST00000472725 CUL2Q13617 745 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 FKBP15Q5T1M5 1219 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 TRIM65Q6PJ69 517 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 ENOSF1Q7L5Y1 443 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 GLYCTKQ8IVS8 523 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 TCEAL8Q8IYN2 117 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 KREMEN2Q8NCW0 462 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 VN1R2Q8NFZ6 395 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 SPPL2BQ8TCT7 592 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 TATDN2Q93075 761 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 RHOBTB2Q9BYZ6 727 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 INTS2Q9H0H0 1204 aaKnown RBP21.34■■□□□ 1.01
SF1-213ENST00000472725 ZDHHC7Q9NXF8 308 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 TAB2Q9NYJ8 693 aa21.34■■□□□ 1.01
SF1-213ENST00000472725 A8MXQ7 604 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 LRRN2O75325 713 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 CDH8P55286 799 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 ARPP19P56211 112 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 LIN9Q5TKA1 542 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 ANKRD54Q6NXT1 300 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 FAM171BQ6P995 826 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 SCARA5Q6ZMJ2 495 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 LUZP1Q86V48 1076 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 CMASQ8NFW8 434 aaPredicted RBP21.33■■□□□ 1.01
SF1-213ENST00000472725 PPM1EQ8WY54 764 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 FUBP3Q96I24 572 aaKnown RBP eCLIP21.33■■□□□ 1.01
SF1-213ENST00000472725 PKMYT1Q99640 499 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 SYT15Q9BQS2 421 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 SDCBP2Q9H190 292 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 VPS16Q9H269 839 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 UBE2ZQ9H832 354 aaPredicted RBP21.33■■□□□ 1.01
SF1-213ENST00000472725 SFXN1Q9H9B4 322 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 ABCB6Q9NP58 842 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 MAN1C1Q9NR34 630 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 DAAM1Q9Y4D1 1078 aa21.33■■□□□ 1.01
SF1-213ENST00000472725 LGALS16A8MUM7 142 aa21.32■■□□□ 1
SF1-213ENST00000472725 PES1O00541 588 aaKnown RBP21.32■■□□□ 1
SF1-213ENST00000472725 LINC01565O15544 149 aa21.32■■□□□ 1
SF1-213ENST00000472725 POU2F2P09086 479 aa21.32■■□□□ 1
SF1-213ENST00000472725 HNRNPA1P09651 372 aaKnown RBP eCLIP21.32■■□□□ 1
SF1-213ENST00000472725 WEE2P0C1S8 567 aa21.32■■□□□ 1
SF1-213ENST00000472725 LMO2P25791 158 aa21.32■■□□□ 1
SF1-213ENST00000472725 PON1P27169 355 aa21.32■■□□□ 1
SF1-213ENST00000472725 LTBRP36941 435 aa21.32■■□□□ 1
SF1-213ENST00000472725 FILIP1LQ4L180 1135 aa21.32■■□□□ 1
SF1-213ENST00000472725 LLGL2Q6P1M3 1020 aa21.32■■□□□ 1
SF1-213ENST00000472725 C4orf50Q6ZRC1 276 aa21.32■■□□□ 1
SF1-213ENST00000472725 APTXQ7Z2E3 356 aaKnown RBP21.32■■□□□ 1
SF1-213ENST00000472725 CRYBG2Q8N1P7 616 aa21.32■■□□□ 1
SF1-213ENST00000472725 MSLNLQ96KJ4 702 aa21.32■■□□□ 1
SF1-213ENST00000472725 MTMR11A4FU01 709 aa21.31■■□□□ 1
SF1-213ENST00000472725 CILPO75339 1184 aa21.31■■□□□ 1
SF1-213ENST00000472725 ZMYND10O75800 440 aa21.31■■□□□ 1
SF1-213ENST00000472725 ATP1A3P13637 1013 aa21.31■■□□□ 1
SF1-213ENST00000472725 RFX1P22670 979 aa21.31■■□□□ 1
SF1-213ENST00000472725 ITIH3Q06033 890 aa21.31■■□□□ 1
SF1-213ENST00000472725 ADCY1Q08828 1119 aa21.31■■□□□ 1
SF1-213ENST00000472725 SLC39A12Q504Y0 691 aa21.31■■□□□ 1
SF1-213ENST00000472725 RNF19BQ6ZMZ0 732 aa21.31■■□□□ 1
SF1-213ENST00000472725 PPM1KQ8N3J5 372 aa21.31■■□□□ 1
SF1-213ENST00000472725 B3GALNT2Q8NCR0 500 aa21.31■■□□□ 1
SF1-213ENST00000472725 MYCBPAPQ8TBZ2 947 aa21.31■■□□□ 1
SF1-213ENST00000472725 CRACR2AQ9BSW2 395 aa21.31■■□□□ 1
SF1-213ENST00000472725 NT5C1AQ9BXI3 368 aa21.31■■□□□ 1
SF1-213ENST00000472725 CISHQ9NSE2 258 aa21.31■■□□□ 1
SF1-213ENST00000472725 CLEC1BQ9P126 229 aa21.31■■□□□ 1
SF1-213ENST00000472725 APEX2Q9UBZ4 518 aa21.31■■□□□ 1
SF1-213ENST00000472725 PCDHB5Q9Y5E4 795 aa21.31■■□□□ 1
SF1-213ENST00000472725 TBX10O75333 385 aa21.3■■□□□ 1
SF1-213ENST00000472725 PDGFRBP09619 1106 aa21.3■■□□□ 1
SF1-213ENST00000472725 OR4Q2P0C623 313 aa21.3■■□□□ 1
SF1-213ENST00000472725 PTPN1P18031 435 aaKnown RBP21.3■■□□□ 1
SF1-213ENST00000472725 ACAT1P24752 427 aaKnown RBP21.3■■□□□ 1
SF1-213ENST00000472725 RAP1GAPP47736 663 aa21.3■■□□□ 1
SF1-213ENST00000472725 TUFMP49411 452 aaKnown RBP21.3■■□□□ 1
SF1-213ENST00000472725 NDST1P52848 882 aa21.3■■□□□ 1
SF1-213ENST00000472725 PLD1Q13393 1074 aa21.3■■□□□ 1
SF1-213ENST00000472725 AAK1Q2M2I8 961 aa21.3■■□□□ 1
SF1-213ENST00000472725 PUS10Q3MIT2 529 aaKnown RBP21.3■■□□□ 1
SF1-213ENST00000472725 CFAP221Q4G0U5 840 aa21.3■■□□□ 1
SF1-213ENST00000472725 LRRTM3Q86VH5 581 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms