RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SESTD1Q86VW0 696 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 VRK3Q8IV63 474 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 SLC15A4Q8N697 577 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 DNAJC5GQ8N7S2 189 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 PJA1Q8NG27 643 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 KIAA1586Q9HCI6 787 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 SACM1LQ9NTJ5 587 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 TMX2Q9Y320 296 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 HS3ST3A1Q9Y663 406 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 A0A087WWL8 130 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 ISM1B1AKI9 464 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 PMM2O15305 246 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 TBC1D4O60343 1298 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 THP07101 528 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 MAKP20794 623 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 ZEB1P37275 1124 aaPredicted RBP7.01□□□□□ -1.29
CLK1-209ENST00000472679 GCLCP48506 637 aaPredicted RBP7.01□□□□□ -1.29
CLK1-209ENST00000472679 ZNF134P52741 427 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 RPS7P62081 194 aaKnown RBP7.01□□□□□ -1.29
CLK1-209ENST00000472679 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLK1-209ENST00000472679 AMOTQ4VCS5 1084 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 SP5Q6BEB4 398 aaPredicted RBP7.01□□□□□ -1.29
CLK1-209ENST00000472679 ZNF627Q7L945 461 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 LARP4BQ92615 738 aaKnown RBP7.01□□□□□ -1.29
CLK1-209ENST00000472679 NEU2Q9Y3R4 380 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
CLK1-209ENST00000472679 TRGV11A0A075B6L2 103 aa7□□□□□ -1.29
CLK1-209ENST00000472679 PIPSLA2A3N6 862 aa7□□□□□ -1.29
CLK1-209ENST00000472679 E7ENX8 843 aa7□□□□□ -1.29
CLK1-209ENST00000472679 PPFIA4O75335 1185 aa7□□□□□ -1.29
CLK1-209ENST00000472679 EGR2P11161 476 aaPredicted RBP7□□□□□ -1.29
CLK1-209ENST00000472679 ITGAMP11215 1152 aa7□□□□□ -1.29
CLK1-209ENST00000472679 ZXDAP98168 799 aa7□□□□□ -1.29
CLK1-209ENST00000472679 TAP2Q03519 686 aa7□□□□□ -1.29
CLK1-209ENST00000472679 LONRF3Q496Y0 759 aa7□□□□□ -1.29
CLK1-209ENST00000472679 PREPLQ4J6C6 727 aaPredicted RBP7□□□□□ -1.29
CLK1-209ENST00000472679 LMBRD2Q68DH5 695 aaPredicted RBP7□□□□□ -1.29
CLK1-209ENST00000472679 COLGALT2Q8IYK4 626 aa7□□□□□ -1.29
CLK1-209ENST00000472679 FAM9AQ8IZU1 332 aaPredicted RBP7□□□□□ -1.29
CLK1-209ENST00000472679 KRT78Q8N1N4 520 aa7□□□□□ -1.29
CLK1-209ENST00000472679 SUCLG2Q96I99 432 aa7□□□□□ -1.29
CLK1-209ENST00000472679 HEPHQ9BQS7 1158 aa7□□□□□ -1.29
CLK1-209ENST00000472679 NAA15Q9BXJ9 866 aaKnown RBP7□□□□□ -1.29
CLK1-209ENST00000472679 ZNF287Q9HBT7 754 aa7□□□□□ -1.29
CLK1-209ENST00000472679 COL20A1Q9P218 1284 aa7□□□□□ -1.29
CLK1-209ENST00000472679 OGDHLQ9ULD0 1010 aa7□□□□□ -1.29
CLK1-209ENST00000472679 TRIM43BA6NCK2 446 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 MYL1P05976 194 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 ZKSCAN1P17029 563 aaPredicted RBP6.99□□□□□ -1.29
CLK1-209ENST00000472679 PIK3CBP42338 1070 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 NPTX2P47972 431 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 NDUFV1P49821 464 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 PTPAQ15257 358 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 Q6ZPA2 131 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 MICALCLQ6ZW33 695 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 MICU3Q86XE3 530 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 MPP5Q8N3R9 675 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 SLC30A5Q8TAD4 765 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 SNX19Q92543 992 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 TRIM43Q96BQ3 446 aaPredicted RBP6.99□□□□□ -1.29
CLK1-209ENST00000472679 PTCD3Q96EY7 689 aaKnown RBP6.99□□□□□ -1.29
CLK1-209ENST00000472679 NUP62CLQ9H1M0 184 aa6.99□□□□□ -1.29
CLK1-209ENST00000472679 F5H697 171 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 F8W8V4 182 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 ADH4P08319 380 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 MYL3P08590 195 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 MCM7P33993 719 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 HNRNPMP52272 730 aaKnown RBP eCLIP6.98□□□□□ -1.29
CLK1-209ENST00000472679 LILRA4P59901 499 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 RPS16P62249 146 aaKnown RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 ABHD18Q0P651 414 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 HLXQ14774 488 aaPredicted RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 IQCB1Q15051 598 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 SF3B3Q15393 1217 aaKnown RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 DCAF12L1Q5VU92 463 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 CCSAPQ6IQ19 270 aaPredicted RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 TMEM108Q6UXF1 575 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 CCDC146Q8IYE0 955 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 OR56A3Q8NH54 315 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 NEU4Q8WWR8 484 aaPredicted RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 PHKBQ93100 1093 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 NMD3Q96D46 503 aaKnown RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 CHST12Q9NRB3 414 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 INTS13Q9NVM9 706 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 TESQ9UGI8 421 aaKnown RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 AFF4Q9UHB7 1163 aaKnown RBP6.98□□□□□ -1.29
CLK1-209ENST00000472679 CORO2BQ9UQ03 480 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 TBC1D30Q9Y2I9 924 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 SPATA31A3Q5VYP0 1347 aa6.98□□□□□ -1.29
CLK1-209ENST00000472679 COL4A3Q01955 1670 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 A0A0B4J269 797 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 MYO1CO00159 1063 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 FZD7O75084 574 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 VIPR2P41587 438 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 TUBB3Q13509 450 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 RBM20Q5T481 1227 aaKnown RBP6.97□□□□□ -1.29
CLK1-209ENST00000472679 VPS53Q5VIR6 699 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 ABHD17BQ5VST6 288 aa6.97□□□□□ -1.29
CLK1-209ENST00000472679 IL31Q6EBC2 164 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms