RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 HIBCHQ6NVY1 386 aaPredicted RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 C6orf89Q6UWU4 347 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 FBXO16Q8IX29 292 aaPredicted RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 CACNA2D3Q8IZS8 1091 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 WDTC1Q8N5D0 677 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 NKD2Q969F2 451 aaPredicted RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 MCEEQ96PE7 176 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 ACTR5Q9H9F9 607 aaPredicted RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 RNF181Q9P0P0 153 aa11.23□□□□□ -0.61
APLF-204ENST00000471727 R3HDM2Q9Y2K5 976 aaKnown RBP11.23□□□□□ -0.61
APLF-204ENST00000471727 hCG_1818297A0A087WSY0 165 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 DNALI1O14645 258 aaPredicted RBP11.22□□□□□ -0.61
APLF-204ENST00000471727 PEX10O60683 326 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 HMGCRP04035 888 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 ITGAVP06756 1048 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 STAG3L1P0CL83 205 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 VDRP11473 427 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 KRT3P12035 628 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 CD19P15391 556 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 CHN1P15882 459 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 GABRB2P47870 512 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 VCPP55072 806 aaKnown RBP11.22□□□□□ -0.61
APLF-204ENST00000471727 RPL7AP62424 266 aaKnown RBP11.22□□□□□ -0.61
APLF-204ENST00000471727 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 MORF4L2Q15014 288 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 LLGL2Q6P1M3 1020 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 ALLCQ8N6M5 410 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 LINC01465Q8N7H1 131 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 GPRC5AQ8NFJ5 357 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 PPTC7Q8NI37 304 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 CLMNQ96JQ2 1002 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 CFAP57Q96MR6 1250 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 NCAPGQ9BPX3 1015 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 SELENOSQ9BQE4 189 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 LGALS13Q9UHV8 139 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 ZNF148Q9UQR1 794 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 LRRC37A2A6NM11 1700 aa11.22□□□□□ -0.61
APLF-204ENST00000471727 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 TRIM66O15016 1216 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 CDH16O75309 829 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 FSBPO95073 299 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 LGALS2P05162 132 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 INSRRP14616 1297 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 DRD4P21917 467 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
APLF-204ENST00000471727 CNGA2Q16280 664 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 MFSD7Q6UXD7 560 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 CCDC121Q6ZUS5 278 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 ARMCX2Q7L311 632 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 ANKS4BQ8N8V4 417 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 TFAP2BQ92481 460 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 TMEM176AQ96HP8 235 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 SEC16BQ96JE7 1060 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 PCDH9Q9HC56 1237 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
APLF-204ENST00000471727 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.61
APLF-204ENST00000471727 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 TPX2Q9ULW0 747 aaKnown RBP11.21□□□□□ -0.61
APLF-204ENST00000471727 C2CD2Q9Y426 696 aa11.21□□□□□ -0.61
APLF-204ENST00000471727 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 F8VP50 259 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 GPR25O00155 361 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CILPO75339 1184 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CAPN15O75808 1086 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 KRT19P08727 400 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CXCL8P10145 99 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ATF7P17544 494 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 PSMA2P25787 234 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CHKAP35790 457 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 GJC1P36383 396 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CDKN2BP42772 138 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 GCLCP48506 637 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 CLCN3P51790 818 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 RAD23BP54727 409 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SNX16P57768 344 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 RBP5P82980 135 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ITIH4Q14624 930 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 RASA2Q15283 850 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
APLF-204ENST00000471727 TAZQ16635 292 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 555.8 ms