RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 NAT8LQ8N9F0 302 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 LINC01599Q8WXQ3 324 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 SDCCAG3Q96C92 435 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 SPON1Q9HCB6 807 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 HEYLQ9NQ87 328 aaPredicted RBP6.81□□□□□ -1.32
NF1-208ENST00000471572 G6PC2Q9NQR9 355 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 SEPT11Q9NVA2 429 aaKnown RBP6.81□□□□□ -1.32
NF1-208ENST00000471572 NAALADL1Q9UQQ1 740 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 DTNAQ9Y4J8 743 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 SNX8Q9Y5X2 465 aa6.81□□□□□ -1.32
NF1-208ENST00000471572 GPR32O75388 356 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 TUBB4AP04350 444 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 GUCY1A2P33402 732 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 TNNT3P45378 269 aaPredicted RBP6.8□□□□□ -1.32
NF1-208ENST00000471572 ZNF200P98182 395 aaPredicted RBP6.8□□□□□ -1.32
NF1-208ENST00000471572 TRIM28Q13263 835 aaKnown RBP6.8□□□□□ -1.32
NF1-208ENST00000471572 FAM180AQ6UWF9 173 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 ZDHHC24Q6UX98 284 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 BEND4Q6ZU67 534 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 TMPRSS7Q7RTY8 843 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 ARMC8Q8IUR7 673 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 SLC15A4Q8N697 577 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 DNAJC5GQ8N7S2 189 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 MKNK2Q9HBH9 465 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 TRPS1Q9UHF7 1281 aa6.8□□□□□ -1.32
NF1-208ENST00000471572 C17orf113A0A1B0GUU1 675 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 DNAJB5O75953 348 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 PSMA3P25788 255 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 MST1P26927 711 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 APEX1P27695 318 aaKnown RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 HADHAP40939 763 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 SLC11A2P49281 568 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 RTP1P59025 263 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 MC1RQ01726 317 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 TRIM71Q2Q1W2 868 aaKnown RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 SLC44A4Q53GD3 710 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 MGARPQ8TDB4 240 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 OR10A5Q9H207 317 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 GALNT8Q9NY28 637 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 PSAT1Q9Y617 370 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 TOP2BQ02880 1626 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 RAD54L2Q9Y4B4 1467 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 STX16-NPEPL1H3BU86 382 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 STX16O14662 325 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 RASSF9O75901 435 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 VSIG8P0DPA2 414 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 DPP6P42658 865 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 NOMO3P69849 1222 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 MEF2AQ02078 507 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 SLC5A9Q2M3M2 681 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 KAZNQ674X7 775 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 SZRD1Q7Z422 152 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 LILRA3Q8N6C8 439 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 BCL7CQ8WUZ0 217 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 NELFAQ9H3P2 528 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 IL21RQ9HBE5 538 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 CCDC177Q9NQR7 707 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 EIF2B3Q9NR50 452 aaKnown RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 RGS17Q9UGC6 210 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 DNAI1Q9UI46 699 aa6.79□□□□□ -1.32
NF1-208ENST00000471572 C19orf53Q9UNZ5 99 aaPredicted RBP6.79□□□□□ -1.32
NF1-208ENST00000471572 AQRO60306 1485 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■■■■ 26.9
NF1-208ENST00000471572 C11orf95C9JLR9 678 aaPredicted RBP6.78□□□□□ -1.32
NF1-208ENST00000471572 TGDSO95455 350 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 LRG1P02750 347 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
NF1-208ENST00000471572 CSH1P0DML2 217 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 CSH2P0DML3 217 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 IDEP14735 1019 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 GGT5P36269 586 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 CLCN7P51798 805 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 AFF3P51826 1226 aaKnown RBP6.78□□□□□ -1.32
NF1-208ENST00000471572 UCP3P55916 312 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 PER3P56645 1201 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 CTXN1P60606 82 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 HABP2Q14520 560 aaPredicted RBP6.78□□□□□ -1.32
NF1-208ENST00000471572 BAK1Q16611 211 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 TTC22Q5TAA0 569 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 LINC00114Q6XXX2 140 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 IQCA1Q86XH1 822 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 PROSER1Q86XN7 944 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
NF1-208ENST00000471572 PIK3C3Q8NEB9 887 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 REPS2Q8NFH8 660 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 ATP2A3Q93084 1043 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 CYFIP2Q96F07 1278 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 TSPAN18Q96SJ8 248 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
NF1-208ENST00000471572 AP5M1Q9H0R1 490 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 VPS16Q9H269 839 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 BCO1Q9HAY6 547 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 KCND3Q9UK17 655 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 USP21Q9UK80 565 aa6.78□□□□□ -1.32
NF1-208ENST00000471572 RUVBL1Q9Y265 456 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms