RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MAFFQ9ULX9 164 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 TNFSF13BQ9Y275 285 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 RAXQ9Y2V3 346 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 GPSM3Q9Y4H4 160 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 ASB3Q9Y575 518 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 WNT6Q9Y6F9 365 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 EML5Q05BV3 1969 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 THADAQ6YHU6 1953 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 GCN1Q92616 2671 aaKnown RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ADAMTS20P59510 1910 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 OR6C75A6NL08 312 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 OPHN1O60890 802 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ALDH1A2O94788 518 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 LARGE1O95461 756 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 PRB1P04280 392 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CXCL8P10145 99 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ODC1P11926 461 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 GJA4P35212 333 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CCT6AP40227 531 aaKnown RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 PTGER3P43115 390 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 GFPT1Q06210 699 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 STRN3Q13033 797 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 GPR17Q13304 367 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 FBXO43Q4G163 708 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CCDC157Q569K6 752 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 LYSMD4Q5XG99 296 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 RUFY3Q7L099 469 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 C11orf74Q86VG3 221 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 MDGA1Q8NFP4 955 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 HMGB4Q8WW32 186 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 MRPS31Q92665 395 aaKnown RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 KIFAP3Q92845 792 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 USP13Q92995 863 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ZBTB45Q96K62 511 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CAMK1GQ96NX5 476 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 PNMA5Q96PV4 448 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 FAM83CQ9BQN1 747 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 BHMT2Q9H2M3 363 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ECT2Q9H8V3 914 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 TUFT1Q9NNX1 390 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 ZDHHC4Q9NPG8 344 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 KMT5AQ9NQR1 393 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 TMEM74BQ9NUR3 256 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 TDP1Q9NUW8 608 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CNTN3Q9P232 1028 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 CYP46A1Q9Y6A2 500 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 SETXQ7Z333 2677 aaKnown RBP7.47□□□□□ -1.21
HDAC1-204ENST00000471488 PHLPP2Q6ZVD8 1323 aa7.47□□□□□ -1.21
HDAC1-204ENST00000471488 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ANTXRLA6NF34 631 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 SFI1A8K8P3 1242 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 H0Y626 953 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 WNT7AO00755 349 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 SLC16A4O15374 487 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 TRIM16O95361 564 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 CKMP06732 381 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 MCF2P10911 925 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 XRCC6P12956 609 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 KCNE1P15382 129 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ITPKAP23677 461 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 TIE1P35590 1138 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 NPTX2P47972 431 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 TUFMP49411 452 aaKnown RBP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 PPP2R3AQ06190 1150 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 NR1H3Q13133 447 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 TRIM29Q14134 588 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 MTF1Q14872 753 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 PDGFRLQ15198 375 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 SDHAF4Q5VUM1 108 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 LMBRD2Q68DH5 695 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ALKAL1Q6UXT8 129 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 METTL23Q86XA0 190 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 SYT12Q8IV01 421 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 MINDY1Q8N5J2 469 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ATP2A3Q93084 1043 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 DCBLD2Q96PD2 775 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 BBC3Q96PG8 261 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 TMEM60Q9H2L4 133 aa7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ORC3Q9UBD5 711 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 NUP210Q8TEM1 1887 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-204ENST00000471488 ABCA7Q8IZY2 2146 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 BTBD18B2RXH4 712 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 M0QZQ0 153 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 SCAMP3O14828 347 aaKnown RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 PPEF2O14830 753 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 SH3BP5O60239 455 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 HIP1RO75146 1068 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 PRPF40AO75400 957 aaKnown RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 OAZ2O95190 189 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 KLF8O95600 359 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ATF6P18850 670 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 GPR15P49685 360 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 GUCY1B3Q02153 619 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 RPL6Q02878 288 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms