RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CPSF1Q10570 1443 aaKnown RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 PPIP5K1Q6PFW1 1433 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 WDR90Q96KV7 1748 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 KIAA1210Q9ULL0 1709 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 ADCY9O60503 1353 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 EXOC5O00471 708 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 TBX3O15119 743 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 KPNA5O15131 536 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 KITP10721 976 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 USP6P35125 1406 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 CASRP41180 1078 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 ALDH1A3P47895 512 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PIK3CGP48736 1102 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 ZNF543Q08ER8 600 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 CHAF1AQ13111 956 aaPredicted RBP6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PABPC1LQ4VXU2 614 aaKnown RBP6.8□□□□□ -1.32
CKS1B-204ENST00000471245 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 SEM1Q6ZVN7 128 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PPP1R3BQ86XI6 285 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 VPS37AQ8NEZ2 397 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 GPHA2Q96T91 129 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 COLEC11Q9BWP8 271 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 ZNF287Q9HBT7 754 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 ARFGAP3Q9NP61 516 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PNPLA8Q9NP80 782 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 CPA4Q9UI42 421 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 ZDHHC8Q9ULC8 765 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PCDHA1Q9Y5I3 950 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 SNX13Q9Y5W8 968 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 SLC4A7Q9Y6M7 1214 aa6.8□□□□□ -1.32
CKS1B-204ENST00000471245 BRD4O60885 1362 aaPredicted RBP6.8□□□□□ -1.32
CKS1B-204ENST00000471245 PNPLA7Q6ZV29 1317 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 TAF1LQ8IZX4 1826 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 BRAFP15056 766 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 TSHRP16473 764 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 TNFSF4P23510 183 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 GZMKP49863 264 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 ARFIP2P53365 341 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 JAG1P78504 1218 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 FMO1Q01740 532 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 PTH1RQ03431 593 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 IZUMO3Q5VZ72 239 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 AFMIDQ63HM1 303 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
CKS1B-204ENST00000471245 TP53I13Q8NBR0 393 aaPredicted RBP6.79□□□□□ -1.32
CKS1B-204ENST00000471245 FBXO18Q8NFZ0 1043 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 CFHR4Q92496 578 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 TRIM54Q9BYV2 358 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 DPH1Q9BZG8 443 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 KCNH6Q9H252 994 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 RLIMQ9NVW2 624 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 PCDHA6Q9UN73 950 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 ZDHHC9Q9Y397 364 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 NR2E1Q9Y466 385 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 PAXBP1Q9Y5B6 917 aa6.79□□□□□ -1.32
CKS1B-204ENST00000471245 NFAT5O94916 1531 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 WNT10BO00744 389 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 PJA2O43164 708 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 SLC26A4O43511 780 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 SASH1O94885 1247 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 IL18RAPO95256 599 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 ZSCAN22P10073 491 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 MTHFD1P11586 935 aaKnown RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 TRAPPC10P48553 1259 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 NPEPPSP55786 919 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 APBA1Q02410 837 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 CREMQ03060 361 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 MRPL49Q13405 166 aaKnown RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 DAG1Q14118 895 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 RNF151Q2KHN1 245 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 INO80DQ53TQ3 878 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 MFSD14BQ5SR56 506 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 ADGRE4PQ86SQ3 457 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 MYLK4Q86YV6 388 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 IL17RDQ8NFM7 739 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 STON2Q8WXE9 905 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 RPL10LQ96L21 214 aaKnown RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 IL23AQ9NPF7 189 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 RUVBL1Q9Y265 456 aaKnown RBP6.78□□□□□ -1.32
CKS1B-204ENST00000471245 MED16Q9Y2X0 877 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 CCDC7Q96M83 1385 aa6.78□□□□□ -1.32
CKS1B-204ENST00000471245 C5P01031 1676 aa6.77□□□□□ -1.32
CKS1B-204ENST00000471245 USP54Q70EL1 1684 aa6.77□□□□□ -1.32
CKS1B-204ENST00000471245 MROH6A6NGR9 719 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 F5H423 210 aaPredicted RBP6.77□□□□□ -1.33
CKS1B-204ENST00000471245 GRM6O15303 877 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 MATN4O95460 622 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 GNAI3P08754 354 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 RAP2AP10114 183 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 STT3AP46977 705 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 SOX8P57073 446 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 GNAI1P63096 354 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 SESTD1Q86VW0 696 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 ARHGEF25Q86VW2 580 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms