RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 VCPIP1Q96JH7 1222 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ZNF560Q96MR9 790 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 AGPAT1Q99943 283 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 PHF7Q9BWX1 381 aaPredicted RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 BCO2Q9BYV7 579 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ZNF518BQ9C0D4 1074 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ISCUQ9H1K1 167 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TLE6Q9H808 572 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 DNAI1Q9UI46 699 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 NOCTQ9UK39 431 aaKnown RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 GIT1Q9Y2X7 761 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 PCDHB7Q9Y5E2 793 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 NCANO14594 1321 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TRIOO75962 3097 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 A0A087X0T9 212 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ANKRD62A6NC57 917 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 TMEM221A6NGB7 291 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 M0R296 226 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 DDX3XO00571 662 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 HOXA2O43364 376 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 NPTXRO95502 500 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 PLEKP08567 350 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 FAM228BP0C875 321 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CYP11B1P15538 503 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 PRLRP16471 622 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 HOXB8P17481 243 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 TNFAIP3P21580 790 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CASQ1P31415 396 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 APBA1Q02410 837 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 INCA1Q0VD86 236 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CBX2Q14781 532 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 STILQ15468 1287 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ARHGAP44Q17R89 818 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ZNF667Q5HYK9 610 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 JADE1Q6IE81 842 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 GJB7Q6PEY0 223 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 SYCE1Q8N0S2 351 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CXorf38Q8TB03 319 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 SPPL3Q8TCT6 385 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 POF1BQ8WVV4 589 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CTNNBL1Q8WYA6 563 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 RFFLQ8WZ73 363 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 CPB2Q96IY4 423 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 MSLNLQ96KJ4 702 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 NAPGQ99747 312 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ALG13Q9NP73 1137 aaKnown RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 LZTFL1Q9NQ48 299 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 RNF14Q9UBS8 474 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 MUTYHQ9UIF7 546 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 AJAP1Q9UKB5 411 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-207ENST00000471218 JRKLQ9Y4A0 524 aa9.76□□□□□ -0.85
PTPRE-207ENST00000471218 ARHGEF37A1IGU5 675 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 LOC730098B7Z3J9 87 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 CES2O00748 559 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 MED7O43513 233 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 RTN2O75298 545 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 LRRN2O75325 713 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 RECQL4O94761 1208 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 MTA2O94776 668 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 NFICP08651 508 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 LINC00271P0C7V0 271 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 ZSCAN20P17040 1043 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 LRPAP1P30533 357 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 WNT7BP56706 349 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 ZXDAP98168 799 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 ARID5AQ03989 594 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 SIGLEC14Q08ET2 396 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 SPOUT1Q5T280 376 aaKnown RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 TWF2Q6IBS0 349 aaKnown RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 SYT10Q6XYQ8 523 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 DPH6Q7L8W6 267 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 FBXL6Q8N531 539 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 CEP120Q8N960 986 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 OLIG1Q8TAK6 271 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 TMEM40Q8WWA1 233 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 DDX1Q92499 740 aaKnown RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 PGBD4Q96DM1 585 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 LACRTQ9GZZ8 138 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 CDHR5Q9HBB8 845 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 APOBEC3GQ9HC16 384 aaKnown RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 NGRNQ9NPE2 291 aaKnown RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 AVENQ9NQS1 362 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-207ENST00000471218 TLR9Q9NR96 1032 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 GDAP2Q9NXN4 497 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 DPP3Q9NY33 737 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 UVRAGQ9P2Y5 699 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 SIX4Q9UIU6 781 aa9.75□□□□□ -0.85
PTPRE-207ENST00000471218 PADI3Q9ULW8 664 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms