RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SPEM2Q0P670 501 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
SF3A1-206ENST00000471037 SEZ6Q53EL9 994 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 DGKKQ5KSL6 1271 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 LONP2Q86WA8 852 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 GPBP1Q86WP2 473 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 YAF2Q8IY57 180 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 GRAMD1CQ8IYS0 662 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 TRIML1Q8N9V2 468 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 SPATA20Q8TB22 786 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 CSGALNACT1Q8TDX6 532 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 CCDC47Q96A33 483 aaKnown RBP9.81□□□□□ -0.84
SF3A1-206ENST00000471037 GSDMAQ96QA5 445 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 TSPAN18Q96SJ8 248 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 GTPBP4Q9BZE4 634 aaKnown RBP9.81□□□□□ -0.84
SF3A1-206ENST00000471037 HAPLN2Q9GZV7 340 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 GZF1Q9H116 711 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-206ENST00000471037 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 SLITRK6Q9H5Y7 841 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 RMND1Q9NWS8 449 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 OBP2AQ9NY56 170 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 HSFX1Q9UBD0 423 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 ASB3Q9Y575 518 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 PCDHA5Q9Y5H7 936 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 EPG5Q9HCE0 2579 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PVALEFA0A1B0GWK0 134 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SYCE3A1L190 88 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 MTMR11A4FU01 709 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 MYMKA6NI61 221 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SLC38A8A6NNN8 435 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SPECC1L-ADORA2AF8WAN1 911 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 H0YCG3 227 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 K7ESF4 209 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 XPOTO43592 962 aaKnown RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 FAM189A1O60320 539 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 FOXD2O60548 495 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 FGF19O95750 216 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 KRT18P05783 430 aaKnown RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ADRB2P07550 413 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 OR4Q2P0C623 313 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SCP2P22307 547 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PAX3P23760 479 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 WEE1P30291 646 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 HOXA6P31267 233 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 CTHP32929 405 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ALDH1A3P47895 512 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 EPHB3P54753 998 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 NCKAP1LP55160 1127 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ZNF445P59923 1031 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ASIC1P78348 528 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PPP2R3AQ06190 1150 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 DUSP4Q13115 394 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 CUL4BQ13620 913 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 MYBPC2Q14324 1141 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 KCNB1Q14721 858 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 CSRP2Q16527 193 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 LPAL2Q16609 132 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 KYAT1Q16773 422 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ARHGAP29Q52LW3 1261 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 STXBP5Q5T5C0 1151 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 CENPPQ6IPU0 288 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PRR23BQ6ZRT6 265 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 GAREM2Q75VX8 874 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 USP37Q86T82 979 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 RALGPS2Q86X27 583 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 ARID3BQ8IVW6 561 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SYNPOQ8N3V7 929 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PSMG2Q969U7 264 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 KIF12Q96FN5 646 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 PGLYRP2Q96PD5 576 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 BLZF1Q9H2G9 400 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 SEMA4GQ9NTN9 838 aa9.8□□□□□ -0.84
SF3A1-206ENST00000471037 LARSQ9P2J5 1176 aaKnown RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 KMT2BQ9UMN6 2715 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-206ENST00000471037 NUP210Q8TEM1 1887 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-206ENST00000471037 CHURC1-FNTBB4DL54 471 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 HRO43593 1189 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 PIGRP01833 764 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 RPN1P04843 607 aaKnown RBP9.79□□□□□ -0.84
SF3A1-206ENST00000471037 CCDC192P0DO97 292 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 TNFSF9P41273 254 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 SOX9P48436 509 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 FNTBP49356 437 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 KPNA1P52294 538 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-206ENST00000471037 PLCB2Q00722 1185 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 SPAG1Q07617 926 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 DMWDQ09019 674 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 RAD51AP2Q09MP3 1159 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 CCINQ13939 588 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 ENOX2Q16206 610 aaKnown RBP9.79□□□□□ -0.84
SF3A1-206ENST00000471037 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 SPATA1Q5VX52 437 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms