RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PDGFRBP09619 1106 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 KCNA4P22459 653 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 MMP8P22894 467 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 CXCR5P32302 372 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 AARSP49588 968 aaKnown RBP eCLIP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 TAF6P49848 677 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 NAP1L1P55209 391 aaKnown RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 GPC5P78333 572 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 TCEAL1Q15170 157 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 TIGD5Q53EQ6 642 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 PPP1R26Q5T8A7 1209 aaPredicted RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 WSCD1Q658N2 575 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 CTNNBL1Q8WYA6 563 aaPredicted RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 RPS6KC1Q96S38 1066 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 C11orf70Q9BRQ4 267 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 LUC7LQ9NQ29 371 aaKnown RBP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 GTF3C4Q9UKN8 822 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.86□□□□□ -0.99
GTF3A-206ENST00000470606 ATP11BQ9Y2G3 1177 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 STXBP5LQ9Y2K9 1186 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 JRKLQ9Y4A0 524 aa8.86□□□□□ -0.99
GTF3A-206ENST00000470606 CDH23Q9H251 3354 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 TRIM43BA6NCK2 446 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 TULP2O00295 520 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 MTA2O94776 668 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 MICAL2O94851 1124 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 EOMESO95936 686 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 P4HA1P13674 534 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 GPD2P43304 727 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 CTCFP49711 727 aaPredicted RBP8.85□□□□□ -0.99
GTF3A-206ENST00000470606 HADHBP55084 474 aaKnown RBP8.85□□□□□ -0.99
GTF3A-206ENST00000470606 DSC1Q08554 894 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 PTPN20Q4JDL3 420 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 DEFB128Q7Z7B8 93 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 NT5DC3Q86UY8 548 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 TTC30AQ86WT1 665 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 MYRIPQ8NFW9 859 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 UBA3Q8TBC4 463 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 HASPINQ8TF76 798 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 TRIM43Q96BQ3 446 aaPredicted RBP8.85□□□□□ -0.99
GTF3A-206ENST00000470606 ZNF653Q96CK0 615 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 SENP8Q96LD8 212 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
GTF3A-206ENST00000470606 CPXM1Q96SM3 734 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 NUP85Q9BW27 656 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 NT5C1AQ9BXI3 368 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 FAM49BQ9NUQ9 324 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 SLC38A7Q9NVC3 462 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 SMARCAL1Q9NZC9 954 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 EHD2Q9NZN4 543 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 DNAJB4Q9UDY4 337 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 CDC23Q9UJX2 597 aa8.85□□□□□ -0.99
GTF3A-206ENST00000470606 TIMM13Q9Y5L4 95 aaPredicted RBP8.85□□□□□ -0.99
GTF3A-206ENST00000470606 PTPRSQ13332 1948 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 LTBP2Q14767 1821 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 DCDC2CA8MYV0 355 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CYB561D2O14569 222 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 GABRDO14764 452 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 XPOTO43592 962 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 ACAT1P24752 427 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 TKTP29401 623 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 PNPLA4P41247 253 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 NSFP46459 744 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 BRCC3P46736 316 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 YWHAEP62258 255 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 GRIK3Q13003 919 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 MAMLD1Q13495 774 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CNGA2Q16280 664 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 PKN2Q16513 984 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 DPH6Q7L8W6 267 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CREG2Q8IUH2 290 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 COLGALT2Q8IYK4 626 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 HACE1Q8IYU2 909 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 ADGRF2Q8IZF7 708 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 OR6B3Q8NGW1 331 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 PGBD4Q96DM1 585 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 ZNF560Q96MR9 790 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 RTP3Q9BQQ7 232 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 LHX5Q9H2C1 402 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 TBC1D13Q9NVG8 400 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 ADAM22Q9P0K1 906 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CTTNBP2NLQ9P2B4 639 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 CNOT8Q9UFF9 292 aaKnown RBP8.84□□□□□ -0.99
GTF3A-206ENST00000470606 TSPAN16Q9UKR8 245 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 SNX12Q9UMY4 172 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 PTPRDP23468 1912 aa8.84□□□□□ -0.99
GTF3A-206ENST00000470606 A8MXQ7 604 aa8.84□□□□□ -1
GTF3A-206ENST00000470606 CTIFO43310 598 aaKnown RBP8.84□□□□□ -1
GTF3A-206ENST00000470606 B3GAT3O94766 335 aa8.84□□□□□ -1
GTF3A-206ENST00000470606 KIF4AO95239 1232 aa8.84□□□□□ -1
GTF3A-206ENST00000470606 LSM8O95777 96 aaKnown RBP8.84□□□□□ -1
GTF3A-206ENST00000470606 ERBB2P04626 1255 aa8.84□□□□□ -1
GTF3A-206ENST00000470606 VDRP11473 427 aa8.84□□□□□ -1
GTF3A-206ENST00000470606 SKIP12755 728 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms