RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
LSM2-209ENST00000470083 BFSP1Q12934 665 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 PSMD2Q13200 908 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 VEPH1Q14D04 833 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 CALCRLQ16602 461 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 PEAR1Q5VY43 1037 aaPredicted RBP13.07□□□□□ -0.32
LSM2-209ENST00000470083 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 RIN3Q8TB24 985 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 OXER1Q8TDS5 423 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 USP33Q8TEY7 942 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 IFT74Q96LB3 600 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 ACO2Q99798 780 aaKnown RBP13.07□□□□□ -0.32
LSM2-209ENST00000470083 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 ATG2BQ96BY7 2078 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 K7ERI5 159 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 OPHN1O60890 802 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 CFIP05156 583 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 MCF2P10911 925 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.323e-8■■■■□ 20
LSM2-209ENST00000470083 P2RY2P41231 377 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
LSM2-209ENST00000470083 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
LSM2-209ENST00000470083 ARMCX6Q7L4S7 300 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
LSM2-209ENST00000470083 TUFT1Q9NNX1 390 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 TUBGCP4Q9UGJ1 667 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 PILRBQ9UKJ0 227 aa13.06□□□□□ -0.32
LSM2-209ENST00000470083 KIF26AQ9ULI4 1882 aaPredicted RBP13.06□□□□□ -0.32
LSM2-209ENST00000470083 GON4LQ3T8J9 2241 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 MAP3K13O43283 966 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 CD59P13987 128 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 ATF6P18850 670 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 HSPA4P34932 840 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 TXKP42681 527 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 TUFMP49411 452 aaKnown RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 CRY1Q16526 586 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 OVOS1Q6IE37 1185 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 TMEM150AQ86TG1 271 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 CATSPER3Q86XQ3 398 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 KIFAP3Q92845 792 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
LSM2-209ENST00000470083 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 MMP17Q9ULZ9 603 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 SLC6A14Q9UN76 642 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
LSM2-209ENST00000470083 URB1O60287 2271 aaKnown RBP13.04□□□□□ -0.32
LSM2-209ENST00000470083 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 ABLIM1O14639 778 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 ALDH1A2O94788 518 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 SERPINF2P08697 491 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 FTH1P19P0C7X4 201 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 XBP1P17861 261 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 TYMPP19971 482 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 PROZP22891 400 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 LRPAP1P30533 357 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 MTF1Q14872 753 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
LSM2-209ENST00000470083 TAF12Q16514 161 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 DUOXA1Q1HG43 343 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 MGAT5BQ3V5L5 792 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 ARMCX5Q6P1M9 558 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 MINDY1Q8N5J2 469 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 MTMR9Q96QG7 549 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 UBL7Q96S82 380 aaPredicted RBP13.04□□□□□ -0.32
LSM2-209ENST00000470083 CAPN10Q9HC96 672 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 FSCN3Q9NQT6 498 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
LSM2-209ENST00000470083 ATXN2Q99700 1313 aaKnown RBP13.04□□□□□ -0.32
LSM2-209ENST00000470083 ZNF462Q96JM2 2506 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
LSM2-209ENST00000470083 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 TK2O00142 265 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 NEMFO60524 1076 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 MED24O75448 989 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 C1QL1O75973 258 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 PRB1P04280 392 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 ITPKAP23677 461 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
LSM2-209ENST00000470083 NLRP12P59046 1061 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms