RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MOGSQ13724 837 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 FASTKD3Q14CZ7 662 aaKnown RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 ZC3H12AQ5D1E8 599 aaKnown RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 POLNQ7Z5Q5 900 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 WDTC1Q8N5D0 677 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PRCCQ92733 491 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PITPNM3Q9BZ71 974 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 SSU72Q9NP77 194 aaKnown RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 SSC5DA1L4H1 1573 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 C19orf81C9J6K1 198 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 UNC5CO95185 931 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 ETS1P14921 441 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 EIF4BP23588 611 aaKnown RBP14.4□□□□□ -0.1
BRCA1-209ENST00000470026 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
BRCA1-209ENST00000470026 IRX3P78415 501 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-209ENST00000470026 GPS1Q13098 491 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 CAPSQ13938 189 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 TAZQ16635 292 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 PDK4Q16654 411 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-209ENST00000470026 KAZNQ674X7 775 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 TXNRD3NBQ6F5E7 133 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 DNAJC24Q6P3W2 148 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 CATSPERGQ6ZRH7 1159 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 TMEM35BQ8NCS4 154 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 SLC7A3Q8WY07 619 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 MCEEQ96PE7 176 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 FRMD8P1Q9BZ68 369 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-209ENST00000470026 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 CXorf56Q9H5V9 222 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 ANKFY1Q9P2R3 1169 aa14.4□□□□□ -0.1
BRCA1-209ENST00000470026 TYROBPO43914 113 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 KRT16P08779 473 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-209ENST00000470026 ELF1P32519 619 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 E2F5Q15329 346 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
BRCA1-209ENST00000470026 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 DCAF15Q66K64 600 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 PCYT2Q99447 389 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 IMPG2Q9BZV3 1241 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 ZMYND8Q9ULU4 1186 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-209ENST00000470026 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.39□□□□□ -0.11
BRCA1-209ENST00000470026 CENPUQ71F23 418 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 AGAP11Q8TF27 550 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 CAMKK2Q96RR4 588 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 DHRS4Q9BTZ2 278 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 GRID1Q9ULK0 1009 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-209ENST00000470026 SNCAIPQ9Y6H5 919 aa14.39□□□□□ -0.11
BRCA1-209ENST00000470026 ABLIM1O14639 778 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 MSCO60682 206 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 EDF1O60869 148 aaKnown RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 CLUHO75153 1309 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 BRD2P25440 801 aaKnown RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 NF2P35240 595 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 GPX6P59796 221 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 STXBP2Q15833 593 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SPDYAQ5MJ70 313 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 PCGF5Q86SE9 256 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 GIMAP7Q8NHV1 300 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 FNIP1Q8TF40 1166 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 CISHQ9NSE2 258 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 E7ESA3 106 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SPAG7O75391 227 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 TOM1L1O75674 476 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 ATP5HO75947 161 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 WFS1O76024 890 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 CCND1P24385 295 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 TNFSF9P41273 254 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 MSH2P43246 934 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 HMGCS2P54868 508 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 MYL6P60660 151 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 ZNF772Q68DY9 489 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 CDCA2Q69YH5 1023 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 GPAT2Q6NUI2 795 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 TFAP2BQ92481 460 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 SMC6Q96SB8 1091 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 PSMC3IPQ9P2W1 217 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-209ENST00000470026 HACL1Q9UJ83 578 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 PHTF1Q9UMS5 762 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 PPME1Q9Y570 386 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 USH1CQ9Y6N9 552 aa14.38□□□□□ -0.11
BRCA1-209ENST00000470026 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 MAFO75444 373 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-209ENST00000470026 EFNA5P52803 228 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 ADCY1Q08828 1119 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 SURF1Q15526 300 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 BBS12Q6ZW61 710 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms