RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 KCNT2Q6UVM3 1135 aa18.64■□□□□ 0.58
RPL39-202ENST00000468844 ZNF606Q8WXB4 792 aa18.64■□□□□ 0.58
RPL39-202ENST00000468844 TFAP2BQ92481 460 aa18.64■□□□□ 0.58
RPL39-202ENST00000468844 ZBED2Q9BTP6 218 aa18.64■□□□□ 0.58
RPL39-202ENST00000468844 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.582e-39■□□□□ 8.3
RPL39-202ENST00000468844 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.58
RPL39-202ENST00000468844 DDX3XO00571 662 aaKnown RBP eCLIP18.64■□□□□ 0.571e-65■■□□□ 13.1
RPL39-202ENST00000468844 TRAPPC3O43617 180 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 LCA5LO95447 670 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 PDGFRBP09619 1106 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 LINC00271P0C7V0 271 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 BRD2P25440 801 aaKnown RBP18.64■□□□□ 0.57
RPL39-202ENST00000468844 CYLC1P35663 651 aaPredicted RBP18.64■□□□□ 0.57
RPL39-202ENST00000468844 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 ACOT1Q86TX2 421 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 ZNF677Q86XU0 584 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 C12orf29Q8N999 325 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 ACRBPQ8NEB7 543 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 SLC30A5Q8TAD4 765 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 SNX25Q9H3E2 840 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 DDX43Q9NXZ2 648 aaKnown RBP18.64■□□□□ 0.57
RPL39-202ENST00000468844 PUF60Q9UHX1 559 aaKnown RBP18.64■□□□□ 0.57
RPL39-202ENST00000468844 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
RPL39-202ENST00000468844 EIF3CLB5ME19 914 aaKnown RBP18.63■□□□□ 0.57
RPL39-202ENST00000468844 THAP12O43422 761 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 CFHP08603 1231 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 TKTP29401 623 aaKnown RBP18.63■□□□□ 0.57
RPL39-202ENST00000468844 CYP27A1Q02318 531 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 VPS36Q86VN1 386 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 IGSF21Q96ID5 467 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 EIF3CQ99613 913 aaKnown RBP18.63■□□□□ 0.57
RPL39-202ENST00000468844 RAD9AQ99638 391 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 RTP3Q9BQQ7 232 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 PCDHB8Q9UN66 801 aa18.63■□□□□ 0.57
RPL39-202ENST00000468844 SF3B1O75533 1304 aaKnown RBP eCLIP18.63■□□□□ 0.573e-6■■■■■ 137.9
RPL39-202ENST00000468844 EFEMP2O95967 443 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 CD19P15391 556 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 TYMPP19971 482 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 ACAT1P24752 427 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 ANXA13P27216 316 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 LHX1P48742 406 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 SHHQ15465 462 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 SP7Q8TDD2 431 aaPredicted RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 PCDHB18PQ96TA0 734 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 LPIN3Q9BQK8 851 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 DSEQ9UL01 958 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 REXO2Q9Y3B8 237 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 PATJQ8NI35 1801 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 ARHGEF37A1IGU5 675 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 LCHNA4D1U4 455 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 TLL1O43897 1013 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 LAG3P18627 525 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 TNFAIP3P21580 790 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 SSTR3P32745 418 aaPredicted RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 FAM171A1Q5VUB5 890 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 OVOS1Q6IE37 1185 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 CRYBG2Q8N1P7 616 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 COLGALT1Q8NBJ5 622 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 B3GALT6Q96L58 329 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 ZNF558Q96NG5 402 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 VN1R3Q9BXE9 311 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 SEPT11Q9NVA2 429 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 NAGPAQ9UK23 515 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 NENFQ9UMX5 172 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
RPL39-202ENST00000468844 ZNF638Q14966 1978 aaKnown RBP18.62■□□□□ 0.57
RPL39-202ENST00000468844 REV3LO60673 3130 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 ATG2AQ2TAZ0 1938 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 SYN3O14994 580 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 VDRP11473 427 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 PSMC1P62191 440 aaKnown RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 YWHAHQ04917 246 aaPredicted RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 CCDC142Q17RM4 750 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 FAM109BQ6ICB4 259 aaPredicted RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 RNF168Q8IYW5 571 aaPredicted RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 FIBCD1Q8N539 461 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 CLP1Q92989 425 aaKnown RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 GDF15Q99988 308 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 FAM170AA1A519 330 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 ATP2C2O75185 946 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 FGFR3P22607 806 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 SGO2Q562F6 1265 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 PPP1R26Q5T8A7 1209 aaPredicted RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 ALKBH5Q6P6C2 394 aaKnown RBP18.61■□□□□ 0.57
RPL39-202ENST00000468844 METTL23Q86XA0 190 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 DNAAF5Q86Y56 855 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 B3GALNT2Q8NCR0 500 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 FAM49BQ9NUQ9 324 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 TAS2R14Q9NYV8 317 aa18.61■□□□□ 0.57
RPL39-202ENST00000468844 GREB1Q4ZG55 1949 aa18.6■□□□□ 0.57
RPL39-202ENST00000468844 O00370 1275 aa18.6■□□□□ 0.57
RPL39-202ENST00000468844 ZNF500O60304 480 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms