RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 EPN2O95208 641 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 ZNF806P0C7X5 589 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 RAP1GAPP47736 663 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 PXNP49023 591 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-207ENST00000468385 ZNF131P52739 623 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 TMEM132DQ14C87 1099 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 CCDC6Q16204 474 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 AASDHQ4L235 1098 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-207ENST00000468385 IL31Q6EBC2 164 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 FSTL4Q6MZW2 842 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 TMEM150AQ86TG1 271 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 KBTBD6Q86V97 674 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 LRRTM3Q86VH5 581 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 GIPC2Q8TF65 315 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 LOXL4Q96JB6 756 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 GCNAQ96QF7 691 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 GKN1Q9NS71 199 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 THG1LQ9NWX6 298 aaKnown RBP14.15□□□□□ -0.14
PTPN7-207ENST00000468385 DSEQ9UL01 958 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 CCL26Q9Y258 94 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 DERAQ9Y315 318 aa14.15□□□□□ -0.14
PTPN7-207ENST00000468385 ANK1P16157 1881 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 GREB1Q4ZG55 1949 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 CYB561D2O14569 222 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 TRDMT1O14717 391 aaKnown RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 TRAK2O60296 914 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 HAPLN1P10915 354 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 SCP2P22307 547 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 PMLP29590 882 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 RUNX3Q13761 415 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 PTPAQ15257 358 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 TRIM68Q6AZZ1 485 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 CACNA2D4Q7Z3S7 1137 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 RIN3Q8TB24 985 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 SPPL2BQ8TCT7 592 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 C2orf15Q8WU43 125 aaKnown RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 USP13Q92995 863 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-207ENST00000468385 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 EBF3Q9H4W6 596 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 ASB7Q9H672 318 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 PARVGQ9HBI0 331 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 ZMYM5Q9UJ78 669 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 C2CD2Q9Y426 696 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 SCN1AP35498 2009 aa14.14□□□□□ -0.15
PTPN7-207ENST00000468385 TISP43B9A030 160 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 ANKRD63C9JTQ0 380 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 FAM13AO94988 1023 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 EGFP01133 1207 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 F11P03951 625 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 HMGA1P17096 107 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 ACOT2P49753 483 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 TAF6P49848 677 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 NLRP12P59046 1061 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 GTF2BQ00403 316 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 SMARCB1Q12824 385 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 GRSF1Q12849 480 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 TAF12Q16514 161 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 N4BP2L1Q5TBK1 243 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 WSCD1Q658N2 575 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 METTL23Q86XA0 190 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 THEM5Q8N1Q8 247 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 MAB21L3Q8N8X9 362 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 C12orf50Q8NA57 414 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 CCSER1Q9C0I3 900 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 FBRSL1Q9HCM7 1045 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 BLOC1S4Q9NUP1 217 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 POLR3BQ9NW08 1133 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 SLC8A2Q9UPR5 921 aa14.13□□□□□ -0.15
PTPN7-207ENST00000468385 MAP1BP46821 2468 aaKnown RBP14.13□□□□□ -0.15
PTPN7-207ENST00000468385 SLC26A4O43511 780 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 ATG13O75143 517 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 RNF40O75150 1001 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 AKAP3O75969 853 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 CCDC192P0DO97 292 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 ARSAP15289 507 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPN7-207ENST00000468385 AVPR1AP37288 418 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 GPR15P49685 360 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 MCM6Q14566 821 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 TXNDC8Q6A555 127 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 EFCAB13Q8IY85 973 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 ZC3H10Q96K80 434 aaKnown RBP14.12□□□□□ -0.15
PTPN7-207ENST00000468385 AK8Q96MA6 479 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 KIF9Q9HAQ2 790 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 TMLHEQ9NVH6 421 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 PPP4R2Q9NY27 417 aa14.12□□□□□ -0.15
PTPN7-207ENST00000468385 DPP3Q9NY33 737 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms