RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 GAS6Q14393 721 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 LPAL2Q16609 132 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 WSCD1Q658N2 575 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 TXNDC11Q6PKC3 985 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 ZNF720Q7Z2F6 126 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 CELF5Q8N6W0 485 aaKnown RBP18.64■□□□□ 0.57
TRIM56-203ENST00000467847 GIPC2Q8TF65 315 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
TRIM56-203ENST00000467847 HVCN1Q96D96 273 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 TASP1Q9H6P5 420 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 GTSE1Q9NYZ3 720 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 DENND4CQ5VZ89 1909 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 DCDC2BA2VCK2 349 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 IL18RAPO95256 599 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 WEE1P30291 646 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 POU5F1Q01860 360 aaKnown RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 POSTNQ15063 836 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 SV2CQ496J9 727 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 LAIR1Q6GTX8 287 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 CRELD2Q6UXH1 353 aaPredicted RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 PRR23BQ6ZRT6 265 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 Q6ZS52 159 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 USP49Q70CQ1 688 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 LRRTM3Q86VH5 581 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 EFCAB13Q8IY85 973 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 BPIFB1Q8TDL5 484 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 RTKNQ9BST9 563 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 SMG9Q9H0W8 520 aaKnown RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 MRPL44Q9H9J2 332 aaKnown RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 IL21Q9HBE4 155 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 ABI2Q9NYB9 513 aaPredicted RBP18.63■□□□□ 0.57
TRIM56-203ENST00000467847 STK17AQ9UEE5 414 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 CCDC39Q9UFE4 941 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 CLIC4Q9Y696 253 aa18.63■□□□□ 0.57
TRIM56-203ENST00000467847 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 HAPLN1P10915 354 aaPredicted RBP18.62■□□□□ 0.57
TRIM56-203ENST00000467847 ADSSP30520 456 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 TNK2Q07912 1038 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 PON2Q15165 354 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 WDR44Q5JSH3 913 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 DGKKQ5KSL6 1271 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 DCP1BQ8IZD4 617 aaKnown RBP18.62■□□□□ 0.57
TRIM56-203ENST00000467847 ZNF560Q96MR9 790 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 PARD6AQ9NPB6 346 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 THG1LQ9NWX6 298 aaKnown RBP18.62■□□□□ 0.57
TRIM56-203ENST00000467847 SEL1LQ9UBV2 794 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
TRIM56-203ENST00000467847 OBSL1O75147 1896 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 CHURC1-FNTBB4DL54 471 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 PPP1R37O75864 691 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 GAP43P17677 238 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 TGM1P22735 817 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 PNPLA4P41247 253 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 FNTBP49356 437 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 DMWDQ09019 674 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 SPEM2Q0P670 501 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 RRAGBQ5VZM2 374 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 NT5DC4Q86YG4 428 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 FAM213AQ9BRX8 229 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 SLC46A2Q9BY10 475 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 TBC1D7Q9P0N9 293 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 FBXO2Q9UK22 296 aaPredicted RBP18.61■□□□□ 0.57
TRIM56-203ENST00000467847 EXOC7Q9UPT5 735 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 PCDHB5Q9Y5E4 795 aa18.61■□□□□ 0.57
TRIM56-203ENST00000467847 MYMKA6NI61 221 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 K7ESF4 209 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 PAPSS2O95340 614 aaPredicted RBP18.6■□□□□ 0.57
TRIM56-203ENST00000467847 RETP07949 1114 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 PDCP20941 246 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 TXLNAP40222 546 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 TFAMQ00059 246 aaKnown RBP18.6■□□□□ 0.57
TRIM56-203ENST00000467847 TSPY1Q01534 308 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 KCNA1Q09470 495 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 SIM2Q14190 667 aaPredicted RBP18.6■□□□□ 0.57
TRIM56-203ENST00000467847 PTPAQ15257 358 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 ITPRIPL2Q3MIP1 535 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 L1TD1Q5T7N2 865 aaKnown RBP18.6■□□□□ 0.57
TRIM56-203ENST00000467847 HEATR6Q6AI08 1181 aaKnown RBP18.6■□□□□ 0.57
TRIM56-203ENST00000467847 SV2BQ7L1I2 683 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 CMTM8Q8IZV2 173 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 SAAL1Q96ER3 474 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 ACCSQ96QU6 501 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 ZMYM5Q9UJ78 669 aa18.6■□□□□ 0.57
TRIM56-203ENST00000467847 HRO43593 1189 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 GCNT3O95395 438 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
TRIM56-203ENST00000467847 POLR2BP30876 1174 aaKnown RBP18.59■□□□□ 0.57
TRIM56-203ENST00000467847 CNR2P34972 360 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 AVPR1AP37288 418 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 WNT7BP56706 349 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 NLRP12P59046 1061 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 SRSF5Q13243 272 aaKnown RBP18.59■□□□□ 0.57
TRIM56-203ENST00000467847 CCINQ13939 588 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
TRIM56-203ENST00000467847 LONP2Q86WA8 852 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 SYNPOQ8N3V7 929 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms