RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 R3HCC1Q9Y3T6 440 aaKnown RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 INSL5Q9Y5Q6 135 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 P4HA2O15460 535 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 HCRTO43612 131 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
MSH5-212ENST00000467319 LRRN2O75325 713 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 CCDC192P0DO97 292 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 IL9P15248 144 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 PCSK1P29120 753 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 ARPP19P56211 112 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 INCA1Q0VD86 236 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
MSH5-212ENST00000467319 CCDC142Q17RM4 750 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 UVSSAQ2YD98 709 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
MSH5-212ENST00000467319 CDKAL1Q5VV42 579 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 SPOPLQ6IQ16 392 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 SASS6Q6UVJ0 657 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 LRRTM3Q86VH5 581 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 THEM5Q8N1Q8 247 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 TTC9BQ8N6N2 239 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 FAXDC2Q96IV6 333 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 PI4K2AQ9BTU6 479 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 RAB20Q9NX57 234 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 DDX43Q9NXZ2 648 aaKnown RBP11.83□□□□□ -0.52
MSH5-212ENST00000467319 HSFX1Q9UBD0 423 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
MSH5-212ENST00000467319 YIPF1Q9Y548 306 aa11.83□□□□□ -0.52
MSH5-212ENST00000467319 P4HA1P13674 534 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 ACAT1P24752 427 aaKnown RBP11.82□□□□□ -0.52
MSH5-212ENST00000467319 RAP1GAPP47736 663 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 TSPY1Q01534 308 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 ZP2Q05996 745 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 ADCY1Q08828 1119 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 SMARCB1Q12824 385 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 SLC39A12Q504Y0 691 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 PPM1LQ5SGD2 360 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 FAM171BQ6P995 826 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
MSH5-212ENST00000467319 C2orf15Q8WU43 125 aaKnown RBP11.82□□□□□ -0.52
MSH5-212ENST00000467319 NECTIN4Q96NY8 510 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 POMKQ9H5K3 350 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 ABCB6Q9NP58 842 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 CRTAC1Q9NQ79 661 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 TMLHEQ9NVH6 421 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 HMGXB4Q9UGU5 601 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 FAM50BQ9Y247 325 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 NFE2L3Q9Y4A8 694 aa11.82□□□□□ -0.52
MSH5-212ENST00000467319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
MSH5-212ENST00000467319 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 AFPP02771 609 aaKnown RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 WEE2P0C1S8 567 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 LMO2P25791 158 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 MTHFRP42898 656 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 PSMC1P62191 440 aaKnown RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 MYL5Q02045 173 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 NCAPHQ15003 741 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 NFE2Q16621 373 aaPredicted RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 CFAP221Q4G0U5 840 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 CES5AQ6NT32 575 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 DCP1BQ8IZD4 617 aaKnown RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 ATAD1Q8NBU5 361 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 SPPL2BQ8TCT7 592 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 SMG7Q92540 1137 aaKnown RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 ARID3AQ99856 593 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 BPIFA3Q9BQP9 254 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 HSD3B7Q9H2F3 369 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 FAM124BQ9H5Z6 455 aaPredicted RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 CYP3A43Q9HB55 503 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 CYP4F11Q9HBI6 524 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 SAMSN1Q9NSI8 373 aaKnown RBP11.81□□□□□ -0.52
MSH5-212ENST00000467319 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 CLUHO75153 1309 aa11.81□□□□□ -0.52
MSH5-212ENST00000467319 MYBPHLA2RUH7 354 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
MSH5-212ENST00000467319 PRRG1O14668 218 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 ATP2C2O75185 946 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 ZNF18P17022 549 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 ATF6P18850 670 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 EEF1GP26641 437 aaKnown RBP11.8□□□□□ -0.52
MSH5-212ENST00000467319 CDH8P55286 799 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 DUSP4Q13115 394 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms