RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 F11P03951 625 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 MPLP40238 635 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
UBR4-211ENST00000467272 NEK4P51957 841 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 CYP4F8P98187 520 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 STRN3Q13033 797 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 C9orf57Q5W0N0 161 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 SLC39A4Q6P5W5 647 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
UBR4-211ENST00000467272 USP13Q92995 863 aaPredicted RBP13.23□□□□□ -0.29
UBR4-211ENST00000467272 FIZ1Q96SL8 496 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 SMOC1Q9H4F8 434 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
UBR4-211ENST00000467272 VPS45Q9NRW7 570 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 GKN1Q9NS71 199 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
UBR4-211ENST00000467272 SPAG17Q6Q759 2223 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 DPYSL4O14531 572 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 ATG13O75143 517 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 EGFP01133 1207 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 HAPLN1P10915 354 aaPredicted RBP13.22□□□□□ -0.29
UBR4-211ENST00000467272 CDC25CP30307 473 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 ZNF131P52739 623 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 RUNX3Q13761 415 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
UBR4-211ENST00000467272 KYAT1Q16773 422 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
UBR4-211ENST00000467272 TCEAL6Q6IPX3 200 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 USP37Q86T82 979 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 LRRC15Q8TF66 581 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 C2orf15Q8WU43 125 aaKnown RBP13.22□□□□□ -0.29
UBR4-211ENST00000467272 TCEAL3Q969E4 200 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
UBR4-211ENST00000467272 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
UBR4-211ENST00000467272 OGTO15294 1046 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
UBR4-211ENST00000467272 ODC1P11926 461 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 SCP2P22307 547 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 GALK1P51570 392 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 SMTNP53814 917 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 NLRP12P59046 1061 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 SMARCB1Q12824 385 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 GRSF1Q12849 480 aaKnown RBP eCLIP13.21□□□□□ -0.29
UBR4-211ENST00000467272 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 DSTYKQ6XUX3 929 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 SYT13Q7L8C5 426 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 CD302Q8IX05 232 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 C12orf50Q8NA57 414 aaPredicted RBP13.21□□□□□ -0.29
UBR4-211ENST00000467272 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
UBR4-211ENST00000467272 DERAQ9Y315 318 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 RALGAPA1Q6GYQ0 2036 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
UBR4-211ENST00000467272 IGSF10Q6WRI0 2623 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 RNF40O75150 1001 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 TADA3O75528 432 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 NFICP08651 508 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 ARSAP15289 507 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 DRD1P21728 446 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 DDX6P26196 483 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBR4-211ENST00000467272 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 PTPAQ15257 358 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 JADE1Q6IE81 842 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 ARMCX5Q6P1M9 558 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 SLC8A2Q9UPR5 921 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 STYXL1Q9Y6J8 313 aa13.2□□□□□ -0.3
UBR4-211ENST00000467272 LNP1A1A4G5 178 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 H0YCG3 227 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 GIPC1O14908 333 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 DCLK1O15075 740 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 XPOTO43592 962 aaKnown RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 NMT1P30419 496 aaKnown RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 GJA4P35212 333 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 ATP2C1P98194 919 aaPredicted RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 FBXO43Q4G163 708 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 SPPL2BQ8TCT7 592 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 MYRFLQ96LU7 910 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 SEPT5Q99719 369 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms